Medicago truncatula (barrel medic): 11415940
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Entry
11415940 CDS
T01716
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11415940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11415940
Spliceosome [BR:
mtr03041
]
Complex B
Other components
Prp19-related factors
11415940
Complex C
11415940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
AS3MT_C
Motif
Other DBs
NCBI-GeneID:
11415940
NCBI-ProteinID:
XP_003594547
UniProt:
G7IKW7
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All DBs
Position
2:complement(11531804..11534244)
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AA seq
613 aa
AA seq
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MAALKELLPEPKSSTTTYYDHSNDPWFKQRFTATEEEKSAAIAPKIVPPYLKRSGFVPRK
VEDFGEGGAFPEIHVAQYPLDMGRNKNSKPGSKILPVTVDAHGNVAYDAIVKQNENAKKI
VYTQHKDLIPKILKNDGDDEMEDGEDEDAQREIDETMEETKAALEKIVNVRLSAAQPKNV
PKHNSDSKYIKYKPSQQNAAFNSGARERVIRMVEMPVDPLEPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVAMRSKVQKEMLLKEKERKEQELRALAQKARSERIGVAPPAAAVPVV
SEKSGVDDGDMRVDYDHRGDRGDRDREREREKNYPKESREEKEERLGREKIRMERRKERE
KERRIEAKDAAMGKKSKITRDRDRDISEKVALGMASTKQGTEVMYDERLFNQDKGMSSGF
ATDDQYNVYDKGLFNAQPTLSTLYRPKKDVDNEAYGGADEQLEKIMKTDRFKPDKSFTGT
SERAPPRDRPVEFESEEADPFGLDQFLTEVKKGKKAMENVGGGGTMRASAGSSMRDSSDG
GSGRTRIGFERGR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgaaggaactccttccagaaccaaaatcatccacaacaacatactatgat
catagcaacgatccatggtttaagcaaagattcactgcaacggaagaggagaaatccgct
gcaatcgcacccaaaattgtaccaccgtatctgaaacgatctggttttgttccacgaaag
gttgaggattttggagaaggtggagctttcccggagatccatgtggcacagtatccgctt
gatatgggaaggaataagaattcgaagccgggttcgaagattcttccggttacggttgat
gctcatggtaatgttgcttatgatgctattgtgaagcagaatgagaatgctaagaagatt
gtttatacccagcataaggatttgataccgaagattttgaagaatgatggagatgatgaa
atggaggatggtgaggacgaggatgctcagcgtgagattgatgagactatggaggaaaca
aaggcggcgcttgagaagattgtgaacgtgaggcttagtgctgcgcagccgaagaatgtt
ccgaagcataattcggattctaagtatataaagtataagccttcgcagcagaatgcggct
tttaattctggtgcgagggagagggttattaggatggttgagatgcctgtggatccactt
gagcctccaaaatttaagcataagagggttcctaaggcttcgggttcacctcctgtgcct
gtgatgcattcacctccgaggcctgttactgtgaaagatcagcaggattggaagatacca
ccttgtatttcgaattggaagaatcctaagggttatactattcctcttgataagcggttg
gctgctgatgggagagggcttcaagaggttcagattaatgataattttgctaagctttct
gaggctttgtatgtcgcagagcagaaggctagagaagctgtagctatgaggtctaaggtg
cagaaggagatgcttttgaaggagaaagaaaggaaggaacaggagttgagggctttggct
cagaaagcacgctcagagagaattggtgtggctcctccggctgctgctgttcccgttgtt
tcggaaaagagtggtgtggatgatggtgatatgagagttgattatgaccacaggggggat
agaggggatagagacagggaaagggaaagggaaaagaactatcccaaggagagtcgggaa
gaaaaagaggagcggctgggacgtgagaagattcgtatggaaaggagaaaggagagggag
aaggagagaaggatagaagctaaggatgctgccatgggaaagaagagcaagattactaga
gatagggatcgtgatataagtgagaaagttgctcttggtatggcttccaccaagcaaggg
acagaggtcatgtatgatgagaggctattcaaccaggataaaggaatgtcttctggattt
gccactgatgatcagtataatgtgtatgataaaggcttgttcaatgcacagccaacactt
tccaccctgtacaggccgaagaaggatgttgataatgaagcttatggaggtgcagacgag
cagctggagaagattatgaagactgatcgctttaagcctgacaaatcatttacagggact
tctgaaagggcacctcctagggataggccggttgagtttgagagcgaagaagctgatcca
tttggtcttgatcagttcttgacagaggtcaagaagggtaagaaggccatggaaaatgta
ggtgggggaggaactatgagagctagtgccggatcttcaatgcgagatagttctgatgga
ggttctggcaggactcgcattggatttgaaagagggcgttaa
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