KEGG   Medicago truncatula (barrel medic): 11416586
Entry
11416586          CDS       T01716                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03010  Ribosome
mtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    11416586
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    11416586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:mtr03011]
    11416586
   04121 Ubiquitin system [BR:mtr04121]
    11416586
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtr04147]
    11416586
Ribosome [BR:mtr03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    11416586
  Archaea
    11416586
Ubiquitin system [BR:mtr04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   11416586
Exosome [BR:mtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   11416586
  Exosomal proteins of colorectal cancer cells
   11416586
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Ubiquitin_5 Thioredox_PDIA6_C Fer2_3
Other DBs
NCBI-GeneID: 11416586
NCBI-ProteinID: XP_003613203
UniProt: G7K080
LinkDB
Position
5:14588332..14589004
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKADA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaaccgggaagacaataaccctcgaagttgaatcttca
gacaccatcgacaatgtgaaagccaagatccaagacaaagaaggaatcccaccggaccaa
caacgtctcatcttcgccggaaaacagctggaagacggccgcactctcgccgactacaac
atccagaaggaatccactcttcaccttgttctccgtctccgtggtggcgcgaagaagagg
aagaagaagacctacactaagccaaagaagattaagcataagcataggaaggtgaaactt
gcggtgttgcagttttataaggttgatgattctgggaaggtgcagaggctgaggaaggag
tgtcctaatgcagagtgtggtgctggaacgttcatggcgaatcactttgatcgtcattat
tgtgggaagtgtggtttgacctatgtttatcagaaagctgatgcttga

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