Medicago truncatula (barrel medic): 11416709
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Entry
11416709 CDS
T01716
Name
(RefSeq) putative disease resistance protein At3g14460
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_R13L1-DRL21
LRR_14
NB-ARC
WH_DRP
LRR_8
DUF815
LRR_4
LRR_1
nSTAND3
NACHT
RuvB_N
AAA_16
LRR_13
AAA
Zeta_toxin
VBS_C3G9
Rx_N
AAA_33
RNaseH_like
LRR_6
Motif
Other DBs
NCBI-GeneID:
11416709
NCBI-ProteinID:
XP_024638921
LinkDB
All DBs
Position
5:12085055..12087809
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AA seq
808 aa
AA seq
DB search
MDVAMISHSISNILQRMDTLKPLAIRLSGIDLDQLENNLKQINDKVQKKSHSEWLQKVKD
VVIDLNDLTEDLRYKESIRSGLSIKNRIKGTRHVKKTTEKLKRLIEQETKLGEEEAAVIS
NTTEKRKSACEDFEKNTKHVAVGRENEKEELIDKLVNLKNTDAAVPVVIVIVGVPGIGKT
KLAHLVCEDEQVEMNFGLQPIWIKTFDVESIAKSVAESHHEKRLLLVIDDLRFEINEPDY
LEKLQKKLTEAVGGRADTAILITTRSNHVADNIAAGHVLKLQGLNQEDSWSLFEEIHGAV
SSQHCTTFKIVRDCRGVPLAIVIVATAMLYNREGSILQPEPHIEKMFLQSFRYIYYEDLP
TYQKLCFAYCSLFPEDYLIDAERLIQLWTAEGFLTISSNNNPEQQFGRACFNDFVPLVFH
QVEEENENQYGGVVTNNNYLYRINPLMHKLARLVTIDSRENITVDSMGEGVHDGMLRVSF
DYALDLLCGIPDCVFEKAKKLRTILLPYNTDNPRLPDEVQMTTSTCDKIFNTFKAMRVLD
MHDLGIKTIPSSIEEVKYLRYLDLSHNNIEKLPSCITTLIHLQTLKLSQCHFLKELPKDM
DDLSCLNHLDLEGCLDLTQMPSGINKLTSLQTLSLFVASKKYVTGGLRELTDLNKLRGHM
EISHLEQVKFSQSKEIAKDEFLKNKKYLGFLTLRWDHEEEEEKESNVNDEKSLDCIVPPS
NLRVLFIVGYNGHTLSDWFGSLHCLVKFTLNDCPKCEFLPPMDELPHLKVLQLRRLDSLK
FIAKNNQVVGGKLRYGIMIDHLSVAFPN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagccatgatttcccattcaatctccaacattctacaaaggatggacacccta
aaacccttagcaattcgactatcaggaattgacctcgaccagcttgaaaacaatcttaaa
caaatcaatgacaaagtccaaaaaaagagccactccgagtggcttcaaaaggttaaagat
gtagtaatcgatttgaacgatttgactgaggatcttcgttacaaagagagtatcagatca
ggcttaagcataaagaatcgcatcaaaggcactcgtcatgttaagaaaaccaccgagaaa
ctcaaacgcctgatcgagcaagagacgaagctaggagaagaagaagcagcagttattagt
aatactactgagaaaagaaagtctgcatgtgaagactttgagaaaaataccaagcatgta
gctgttggaagagaaaatgagaaggaagagcttatagataaactggtgaacctgaagaac
actgatgctgctgttcctgttgttattgttattgttggtgttcctggaattggcaaaaca
aaacttgctcatctcgtttgtgaggatgagcaagtcgaaatgaattttgggttacaacca
atttggatcaaaacctttgatgttgaatctatagcaaaaagtgttgccgagtctcatcat
gagaaacgcctcttacttgttatagatgatttgagatttgagattaatgagcctgattat
cttgagaagttgcagaagaaattaactgaagctgttggtggccgtgctgatacggccata
ctcattactacacgtagtaaccatgtcgccgacaacattgctgctggacatgttttgaag
ttgcaggggcttaatcaagaggattcttggtccttgtttgaggaaattcatggagcagtt
tcaagccaacactgcaccacatttaagatcgtgagggattgtcgtggagtccctcttgca
atagtgatcgtagcgacagcgatgctctataatcgcgagggctcgattctgcaaccagaa
cctcacatagagaagatgtttctacaaagtttcaggtatatctattacgaagatcttccc
acgtatcagaagttgtgctttgcatattgttcattgtttccagaagattatttaattgat
gccgagagattaattcaactttggacggctgaaggatttctaacaatttcctcaaacaac
aatccagaacaacaatttggtcgagcttgtttcaacgactttgttcctttggtttttcat
caagtggaagaagaaaacgaaaaccaatacggtggtgttgtgacaaacaacaactactta
tatagaataaacccgttaatgcataaacttgcaaggctagtcaccatcgacagtcgtgaa
aacatcaccgtggattcgatgggggagggtgttcacgatggaatgctacgagtttcgttt
gattatgctttagatttgttgtgtgggatcccagattgtgtgtttgagaaagctaaaaaa
ctgaggaccattcttttgccatacaacactgacaaccctcggcttcctgacgaggtacag
atgacaacatcaacctgtgataagatctttaacaccttcaaagctatgcgcgtgttagat
atgcatgacttggggatcaagacgattccgagctctattgaagaggtgaagtacttgagg
tatctagatctttctcataacaacatagagaagcttcctagttgcatcacaactcttatc
cacttgcaaacgttgaaactttctcaatgtcattttctcaaggaattgccaaaagacatg
gatgatttgagttgcctcaaccatcttgacttagagggatgcttggatctaactcaaatg
ccaagtgggataaataagctcacttctttacaaacattgtcactctttgtagctagcaag
aaatacgttacaggaggactaagagaactcaccgatctcaacaaactgagaggtcacatg
gaaatttcgcatctggaacaagtcaagttctcgcaatccaaggaaattgctaaagatgaa
tttttgaaaaacaaaaaataccttgggttcttgactctaagatgggatcatgaggaggag
gaggagaaggaaagcaatgtcaacgacgagaagtcgcttgactgtattgtgccaccttcg
aatctgagagtgttattcattgtggggtacaatggtcacaccttgtctgactggttcggt
tcacttcattgtcttgttaagtttaccttgaatgactgcccaaaatgcgaatttctcccg
ccaatggatgagcttccacatctcaaggttctccaacttcgaaggttggactcactgaaa
ttcattgcaaaaaacaatcaagttgttggtgggaaactgagatatgggataatgatagac
catctttcagttgcatttccaaactaa
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