Medicago truncatula (barrel medic): 11416746
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Entry
11416746 CDS
T01716
Name
(RefSeq) transcription factor SPT20 homolog
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
11416746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11416746
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
11416746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
TEA
ORC_WH_C
Motif
Other DBs
NCBI-GeneID:
11416746
NCBI-ProteinID:
XP_024628307
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All DBs
Position
8:48676129..48680229
Genome browser
AA seq
814 aa
AA seq
DB search
MTFSFGNVFPANVKVLVIDHDIHLLNAIEKKLSQFNYQVTTCWTVSSAMNLIAQKVHFDL
VLLETQMPDMDSFDFLQQLTQQIDIPVIMTMCSEGSTTGILNAIENGACDCWVKPFSENQ
VKYMWHHAVRKMMKGNKKQKINEQLGVEGSQIRARDDSNLCLNDEDIPEPPPTKKTKKRK
KTKKTKKERVVWSLELHEQFMKAVKELDASSSSSSSKAVPKTILEHMKVPGLTREQVGSH
LQKYRLYLNKHQQEHEQALLVVESNSSHDRSPKLYFQAYDASAHAVVLESSQWSHNSHVA
EQQYPMAYACSSQQVPRKLLPRHFPQQPNMNLHHGYATWEQQLPSEYYIADHAVGLGSLT
ANNSNAMLQQEEDINNQQQSPMHVPHMNNAVNDGVSSVDNIVEVNNTITDFGEATMQVEI
GPQVQELERVVAGPQDQELGRVVAGPQAQPQELERVVAGPQDQELGRVVIAPQAQPQELG
RVVAGPHAQELGRMVAAPQDQPQKLGRVMAAPHAQPQKLGRVVAGPQAQPQELERVVAGP
QDQELGRVVIAPQAQPQELGRVVAGPHAQELGRMVAAPQDQPQKLGRVMAAPHAQPQKLG
RVVAGPQAQPQELGMVVAGPQTQELGRVVVAPQTQPQKLGRVVASPQAQAQELERVVVAP
HAQPQELGRVVAGPQAQPQELGMVVAGSQTQKLRRVVAAPQTQPQKLGRVVAGPQAQEIG
RVVASPHAQPQELGRVVATPQAQPQKLGRVVAGPQAQPQELGMVVTGSQTQKLGRVVAGP
QAQELGRMVAAPQTQPQELGRGKRYKKANTRYTQ
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgactttttcctttgggaatgtgtttccagccaatgttaaagttcttgtgattgatcat
gatatccatcttctcaatgctattgagaaaaaattgtctcaattcaattaccaagttacg
acatgctggacggtttcttcagccatgaatttgatagcacaaaaggtgcattttgatttg
gtactacttgaaactcaaatgcccgacatggattcatttgatttcttgcaacaattgaca
caacaaatcgatattcctgtcattatgacgatgtgttctgaaggatcaacaactggaata
ttgaatgcaattgaaaatggagcttgtgactgttgggtcaagccattctctgaaaatcaa
gtaaagtatatgtggcatcatgctgttaggaaaatgatgaaaggaaataaaaaacaaaaa
atcaatgagcaattgggggttgaaggtagccaaataagggcaagagatgattcaaattta
tgcttaaatgacgaagatatacccgaaccacccccgacaaagaagacaaagaagagaaag
aagacgaagaagacgaagaaggagcgtgtggtatggtctttagaattacatgagcaattc
atgaaggctgttaaagaacttgatgcttccagttccagttccagttccaaggcggtgcca
aaaacaattcttgaacatatgaaggtgcctggacttacaagggagcaggtaggcagtcat
cttcagaaatatagattatatttaaataaacatcaacaagaacatgagcaagctctcctg
gttgtggaatccaacagttcacatgatagatctccaaaactttattttcaagcttatgat
gcttctgctcatgctgttgtattagaatcatcacagtggtctcacaattctcatgttgca
gaacaacaatatccaatggcatatgcttgcagttctcaacaagttcccagaaaattgtta
ccaaggcattttcctcaacaacccaacatgaacctacatcatggatatgcaacatgggag
caacaacttccaagtgaatattatatagctgatcacgcagttggtcttggaagcttgaca
gcgaataatagtaatgcaatgcttcagcaggaagaagatattaataatcaacaacaatca
ccaatgcatgttcctcatatgaataatgcagttaatgatggtgtatcgagtgtggacaac
atcgtggaagtgaataatactataacagatttcggtgaagctacaatgcaagtggagatt
ggtcctcaggttcaagagctagaaagggtggtagctggtcctcaagatcaagagctagga
agggtggtggctggtcctcaggctcaacctcaagagctagaaagggtggtagctggtcct
caagatcaagagctaggaagggtggtgattgctcctcaggctcaacctcaagagctagga
agggtggtagctggtcctcatgctcaagagctaggaaggatggttgctgctccacaggat
caacctcaaaagctaggaagggtgatggctgctccacatgctcagcctcaaaagctagga
agggtggtggctggtcctcaggctcaacctcaagagctagaaagggtggtagctggtcct
caagatcaagagctaggaagggtggtgattgctcctcaggctcaacctcaagagctagga
agggtggtagctggtcctcatgctcaagagctaggaaggatggttgctgctccacaggat
caacctcaaaagctaggaagggtgatggctgctccacatgctcagcctcaaaagctagga
agggtggtggcgggtcctcaagctcaacctcaagagctaggaatggtggtggctggtcct
cagactcaagagctaggaagggtggttgttgctccacagactcaacctcaaaagctagga
agggtggttgctagtcctcaagctcaggctcaagagctagaaagagtggtggttgctcca
catgctcaacctcaagagctaggaagggtggtggctggtcctcaagctcagcctcaagag
ctaggaatggtggtggctggttctcagactcaaaagctaagaagggtggttgctgctcca
cagacccaacctcaaaagctaggaagggtggtggctggtcctcaggctcaagagatagga
agggtggtggcttctccacatgctcaacctcaagagctgggaagggtggttgctactcca
caggctcaacctcaaaagctaggaagggtggtggctggtcctcaagctcagcctcaagag
ttaggaatggtggtgactggttctcagactcaaaagctaggaagggtagtggctggtcct
caggctcaagagctaggaaggatggtggctgctccacaaactcagcctcaagagcttgga
aggggaaagaggtataagaaggctaacacaagatatactcaatga
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