Medicago truncatula (barrel medic): 11416753
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Entry
11416753 CDS
T01716
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11416753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11416753
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11416753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
11416753
NCBI-ProteinID:
XP_003630944
UniProt:
G7LAL2
LinkDB
All DBs
Position
8:complement(48549664..48559912)
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AA seq
1484 aa
AA seq
DB search
MSWEDEIVIRDVTNAGLVVSDRIGREISSQLDLEESLEASRYASHPYSTHPREWPPLVEV
ANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE
EQAICAVGLAKSKHGVFVEAIQYLLILATPVELILVGVCCSGGADGSDPFAEVSLQPLPD
YTIPSDGVTMTSVACTDKGRIFLAGRDGHIYELIYSTGSGWQKRCRKVCVTAGLGSVISR
WVIPNVFNFGAVDPVVEMVFDNERQILYARTEEMKLQVYVLGPIGDGPLKKIAEERNLVN
HKDAHHGGRQSSGSRVSSRSPKPSIVCISPLSTLESKSLHLVAVLSDGRRMYLSTSPSSG
SLNGFNTSHHKPSCLKVVTTRPSPPWGVSGGLTFGTMALAGRPQNEDLSLKVEAAYYSAG
TLILSDASPPTMPSLLVLNRDSSTQSSPSGNLGTGTRSSRALRETVSSLPVEGRMLSVAD
VLPLPDTSATVQSLYSEIEFGGYESSMESCERASGKLWARGDLSTQHILPRRRIVIFSTM
GMMEIVFNRPLDILRRLLESSSPRSVLEDFFNRFGAGEASAMCLMLASRIVHSENFISNV
IAEKAAEAFEDPRLVGMPQLEGSNALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCS
SRLLFPLWELPVMVIKGSLSASGTSFENGVVVCRLSIEAMQVLEHKLRSLEKFLRSRRNQ
RRGLYGCVAGLGDVSGSILYGGGSALGAGDRSMVRTLFGAYSKNMESNGGGAANKRQRLP
YSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQQALVQLTFH
QLVCSEEGDHLATRLISALMEYYTGTDGRGTVDDISKRLREGCPSYYKESDYKFFLAVEA
LERAAVTIDDEEKETLAREALNALSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKAQAI
DPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLKGDPSRKEFGSPIGSASQSALDP
ASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLKSAGRTPIH
EVRAVTATTSPMGQSGAPMSSNQVKYFELLARYYVLKRQHMLAAHALLRLAGRPSTDGVP
TLEQRCQYLSNAVLQAKNATNSDGLVSSTRSSSDTGLLDMLEGKLAVLRFQIKIKEELEH
MASSSEVLHSTSNSVENGLVSDASPTVDANFANATREKAKELSSDLKSITQLYNEYAVPF
KLWETCLEMLYFANYSGDSDSSIVRETWARLIDQAISGGGIAEACSVLKRLGPRLYPGDG
TVFQLDIICLHLEKAALERLNTGVESVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAI
LPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGATGSSIIIGGGFSLERTVASQGIRDKI
TSVANRYMTEVRRLALPQSQTEGVYCGFKELEESLISPHSFDRF
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggaagacgagattgtgattcgtgatgtcaccaacgccggtcttgtcgtcagt
gatcgaattggccgtgaaatttcttctcagctcgacctcgaagaatctctagaagcttcc
cgatatgccagtcatccttattcaactcaccctagagagtggccccctttggttgaggta
gcaaatacatgggagttgcctcctgttcttattgaaagatacaatgcggctggtggggaa
ggaactgctttttgtggaatatttcctgaaatacgtagggcatgggcgtcagttgacaat
tctttgttcctctggcgttttgataagtgggatggtcagtgtcctgaatatagtggcgag
gaacaagctatttgtgctgttggtctggcaaaatcaaagcatggtgtttttgttgaagct
atccagtatcttttaatcttagcaacccctgttgagttaattttagttggagtgtgctgc
tctggaggagcagatggctcagatccatttgcagaagtttcgttacagccattgccagat
tatacaataccatccgatggggttacgatgacaagtgtggcatgtactgataagggccgc
attttccttgctggtcgtgatggccacatatatgagcttatttattcaactggctcagga
tggcaaaagcgctgcagaaaagtatgcgtcactgctggtctaggaagtgtaatttcaaga
tgggtcataccaaatgtattcaattttggagctgttgaccctgttgttgaaatggttttt
gacaatgagagacagatattgtatgcacggactgaagagatgaagcttcaggtttatgtt
cttggaccaattggtgatgggccactaaagaaaattgctgaagaaaggaatcttgtcaat
cacaaagatgcacatcatggaggtagacaatcaagtggatcaagagtatcaagtcgatca
ccaaagccatctattgtttgcatctcacccttatctacccttgaatcgaaatcgctacat
cttgttgctgttttatcagatggtagaaggatgtacctatccacctctccttctagcgga
agcctgaatggattcaacaccagccatcacaagcctagctgtttaaaggttgtcacaaca
cggccttctcctccttggggtgttagtggcggtctcacctttggaaccatggctcttgct
ggtagacctcaaaatgaggatctctcgttgaaagtcgaggcagcctattattctgctgga
actcttatcctttctgatgcatcacctccaactatgccttcactccttgttttaaacagg
gattcgagcactcagtcctcaccatcaggaaatctaggaacaggtacgaggagttcccgg
gcattacgggaaactgtatcttctttaccagttgaaggacgaatgctttctgtggccgat
gttttacctctaccagacacttcagctactgttcagtctctatactcagaaattgagttt
ggtggttacgagagctcaatggaatcatgtgaaagggcgtctggcaaactgtgggcaaga
ggagatctctcaacccaacatatactgccaaggaggaggattgtcatcttcagcaccatg
ggcatgatggaaattgtttttaacaggccattagacattttaaggcggctattagagtcc
agttctccgagatcagttttagaagatttcttcaatcgttttggagccggagaggcttct
gcgatgtgtttaatgctagcttcgaggatagtacattctgaaaactttatcagcaatgtt
attgcagagaaggcagctgaagcttttgaggatccaagacttgttggcatgccacaactt
gaaggcagtaatgcattatcaaacacaagaacagctgctggtggatttagcatgggccag
gttgttcaggaggctgagcctgttttttcaggtgcacatgaagggctctgtttgtgttca
tctagattactctttcctctatgggaactacctgtaatggttataaaaggaagtttaagt
gcttcaggcacttcatttgaaaatggggtagttgtatgtagactatccatcgaggctatg
caagtccttgaacacaaacttcgatctttagaaaaattcttaagatctagaaggaaccag
aggagaggactctatggttgtgtagcaggattaggagatgtaagtggttccattctatat
ggtggtggttctgcattgggtgctggtgaccgaagtatggtaagaaccttgttcggtgca
tattccaaaaatatggagtctaatggcggtggagccgcaaataaaaggcaaaggttgccg
tacagtcctgcagaattagctgccatggaggtgagggcaatggagtgcattaggcagttg
ctccttagatctggtgaagctctctttttgcttcaacttctctcacagcatcatgtcact
cgtctgattcaaggatttgatgctaaccttcaacaagccctagttcagttaacatttcat
caactagtttgttctgaagagggtgaccatcttgctacaaggcttatatctgctctaatg
gagtattacactggtacagatggtaggggaactgtagatgacattagtaagagattaaga
gagggttgcccgagctactataaggaatctgattacaaattcttcttagccgtggaagcc
ctggagagagctgctgtgactatagatgatgaggaaaaggagactctcgcgcgggaggca
ttgaatgccttaagcaaagttccagagtctgcagacttacgtactgtttgcaaacgtttt
gaggatttaaggttttatgaagctgtagtttgcttacctcttcagaaggcacaggctatc
gaccctgcaggcgatgcttataatgatgaaattgatgccacggtcagagaacaagcactt
gctcagcgtgagcagtgttatgaaataatcatcagtgcgctgcggtctcttaaaggtgac
ccctcacggaaggaatttggttctcccattggatctgcttcacaatctgcacttgatcca
gcctctcggaaaaagtatataagccaaattgttcagctgggtgtccaatcacccgacaga
attttccatgagtatctttatcaggctatgatagacttaggtcttgagaatgaattgttg
gagtatggaggccctgacctattgcccttcttgaaaagtgctggtcgtacacccatacat
gaggttcgtgctgtgactgcaacaacttctccaatgggccaatcgggagcacctatgtcg
tccaatcaagtcaagtactttgaacttttggcacggtattatgtgttgaagcggcaacac
atgcttgctgctcatgcattgctaagactggccggaaggccttctactgatggagttcct
actcttgagcagaggtgtcaatacctaagcaatgcagttttacaggcaaagaatgcaaca
aatagcgatgggttggttagttctactcggagttccagcgacactggattactagatatg
cttgaagggaagcttgctgttcttcggtttcagataaaaatcaaagaggaactagagcat
atggcttccagttctgaggttttacacagcacatccaattctgttgaaaatggtttagtc
tctgatgccagtccaactgttgatgccaattttgcaaatgcaacacgcgagaaagccaaa
gagctatcatcagatttgaagagcataacacagttatataatgaatatgctgttcccttt
aaactctgggagacatgcctggagatgctgtactttgctaactattctggtgatagtgac
agtagcattgtcagagagacatgggctcgacttatagatcaagctatttcaggaggtggc
attgctgaagcttgctctgtgctaaagagacttgggccccgcctttatcctggtgatgga
actgtttttcagcttgacattatttgtcttcaccttgagaaagctgcactggagagatta
aatacaggggttgaatccgttggagatgaagatgttgcgagagcccttgtttctgcttgt
aagggtgcagcagaacctgtattgaacgcatatgatcaattgttatcaaatggggcaatt
ttgccatccccaaatcttagattacggatgctgagatctgttctagtggtacttcgtgag
tgggctatgtctatatattcacacaggatgggtacaggtgccactggttcttccataata
ataggcggtggattctcattggaacgtacagttgctagccaaggaattagggacaaaatc
acaagtgtagcaaacaggtatatgactgaagtacggaggttagcccttccacagagccaa
acagaaggggtttactgcggctttaaagaacttgaagagtctctcataagtcctcattca
tttgatcgattttga
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