Medicago truncatula (barrel medic): 11416983
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Entry
11416983 CDS
T01716
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
11416983
Enzymes [BR:
mtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
11416983
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
11416983
Prokaryotic type
11416983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
11416983
NCBI-ProteinID:
XP_003615969
UniProt:
G7KFJ6
LinkDB
All DBs
Position
5:complement(33009710..33013891)
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AA seq
483 aa
AA seq
DB search
MLFTSLQSPSPLFQTRNPNLLFHILPPKTLFKCFCSSSTTDSLPSLPPEKWVPYLKKKVV
MRVGYIGTDFRGLQIQRNDHKLSTIEKELETAIFKVGGIRDSNYGDLDKINWGRSSRTDK
GVHSLSTMISFKMEIPENAWKGDDYGIEMANHINSYLPNSIRVFSVLPSTKRFDPRKECS
MRKYSYLLPADIIGVQSHFSEDETDFHISEFNSILGAFEGDHPFHNYTVRSVYRKKHHAR
KSPGNGGMSNMTGSSSLVSACDSENEESDTDDSMSGNGEQSHKSQECSESNSLKARWLHE
PDAADRLNASHFRKILRCSCGKLETLLGYNYIEIDVWGDSFMLHQIRKMVGTAVAVKRNS
IPKDIFLLSLIKFSRIVLPIAPPEVLILRGNAFRMWSSGGSYTRPEMVSMVESEQILKSV
DEFYTSVMLPELSKFLDSSKSPWADWVEKLDKYSSIPNDQLEEVREAWRTWKENFRAKPA
SEA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcacttctctgcaatccccatccccactcttccaaactcgaaaccctaacctc
ctatttcatattcttcctccaaaaacactcttcaaatgcttctgttcttcttccaccacc
gactcacttccttctctcccccctgagaaatgggtaccttatctcaagaaaaaggttgtt
atgagagttggatacattggaaccgattttagaggtcttcaaattcaacggaatgaccac
aagttatccactattgagaaagaacttgaaactgctattttcaaggtcggtggcatccgt
gacagtaattatggtgatctggataagattaattggggccgaagtagcagaactgataaa
ggagtccattctctgtcaacaatgatatcttttaagatggaaatccctgagaatgcatgg
aaaggagatgattatggcattgaaatggcaaaccacattaattcttatcttcctaatagt
atcagagtttttagtgtattgccttcaacaaaaagattcgatcctaggaaagagtgcagt
atgcggaaatactcttacctcctccctgctgatataataggagtccagagtcattttagt
gaggatgaaacagactttcacatttctgagttcaacagtatacttggtgcttttgaggga
gatcatcctttccataattatactgttcggtctgtatacaggaaaaaacaccatgcaagg
aaatcaccaggaaatggcggcatgtcaaacatgacaggatcatctagtttggtatcagct
tgtgattcagagaatgaggaaagtgatactgatgattctatgagtggtaatggggaacag
agccacaagtctcaagagtgtagtgaatccaatagtttgaaagcaagatggttgcacgaa
ccggatgcggcagatagattaaatgcttctcatttcagaaagattttacgttgttcttgt
ggaaagttggagacactacttggatataattatatcgagatcgatgtatggggggattcc
ttcatgttacatcaaatacgcaagatggtcggtactgctgtggctgtaaagcgcaactca
attccaaaggacatctttttattgtcactcattaagttttcccgaatcgtcctcccaatt
gcccctccagaagttttgattttgagaggaaatgctttcaggatgtggtcaagtggtgga
agctacacaaggcctgaaatggtgtccatggttgaatcagaacaaattcttaaatctgtc
gatgagttctacacatctgttatgttgcctgaattgtcaaagtttctagactcgtcaaag
tctccttgggcggactgggttgagaaactggataagtattcaagcattccaaatgatcaa
ctggaggaagttagagaggcttggaggacatggaaggaaaatttccgggcaaaaccagca
tcagaggcatag
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integrated database retrieval system
