Medicago truncatula (barrel medic): 11417237
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Entry
11417237 CDS
T01716
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
11417237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11417237
03036 Chromosome and associated proteins [BR:
mtr03036
]
11417237
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
11417237
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
11417237
PBAF complex
11417237
GBAF(ncBAF) complex
11417237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
11417237
NCBI-ProteinID:
XP_003603876
UniProt:
G7J6G8
LinkDB
All DBs
Position
3:complement(57693944..57696606)
Genome browser
AA seq
483 aa
AA seq
DB search
MATSTPNRTVEPPSSATGTPLPPTTTPPPSNPPQPPPVAKPEVPLPEAKTSSDANLILVP
SHSRWFSWDSIHECEIRNIPESSKNPRVYKYYRNSIVKFFRFNPNRKITFTDVRKTLVGD
VGSIRRVFDFLEAWGLINYHPSSSLSKPLKWEDKDTKPDAASNSAESPSPAPVKEAKRIC
SGCKNLCVMACFACEKNNMTLCARCFIRGNYRIGMSNTEFKRVEISEETKNEWTEKETLN
LLEAITNFGDDWKRVAHQVVGRTDKECVARFLELPFGDQFLHYPHSESAPCIDDGSDQLK
PPVAAECESETVPSDKSSKRMCLTPLADASNPIMAQAAFLSALAGTEVAQAAAQAALTSL
SNVYKSTRINYRSFPRNTLQQDAAVASNGGNASDSIQGSLLRANLQLEKEESDVEKAISE
VTEVQMKNIQDKLINFEDLDVLMEKERQQLEQTKSLFFLDQLNLLFRKTSAPTTGEGNHV
KRN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcaaccccaaacagaaccgtcgagcctccgtcttccgccaccggaacacct
ctacctccgactactactccgcctccctcgaacccaccacaaccgcctccggtggcgaaa
ccggaagtcccattaccagaagccaaaacctctagcgacgccaacttaatccttgtccct
agccactcaagatggttctcgtgggattccattcacgaatgcgaaatccgcaacattccc
gaatcttccaagaaccctagggtttacaaatactacagaaactctattgtcaagtttttc
agattcaatcctaacaggaaaatcaccttcaccgatgttcgcaaaaccctagtcggtgac
gttggttccattcgaagagtgtttgattttcttgaagcttggggtttaatcaattatcat
ccttcttcttcgctcagtaaacctctcaaatgggaagataaagacaccaaacccgacgca
gcatcgaattccgcagaatctccttctccggcacctgtcaaagaagctaagagaatctgt
agtggctgcaaaaatctctgtgtcatggcttgctttgcctgtgaaaagaataatatgacg
ttgtgtgcgaggtgttttattcgtggaaattatcgaattggtatgagtaatacagaattc
aagagagtggagataagcgaggagacgaaaaatgaatggactgagaaggaaacactgaat
cttcttgaagctattacgaatttcggtgatgattggaagagggttgctcatcaagttgtt
ggtaggaccgacaaggaatgcgttgctcgttttttagagcttccttttggtgatcagttt
ctgcattatccacactccgagtctgctccttgcattgatgatggttctgatcagttgaag
cctcccgttgctgctgaatgtgaatccgaaactgttccgtcggataaatctagtaagaga
atgtgtctcacacctcttgcggatgctagcaatcctatcatggctcaggctgctttcctt
tctgctttggcagggacggaggttgcgcaagctgcagctcaagctgctctgacaagtttg
tccaatgtttacaaatcaactagaattaattaccggtcatttccaaggaatacattgcag
caagatgctgctgttgcatccaatggtggtaatgcttcagattctatccaaggatcttta
ttgcgtgcaaatttacagcttgagaaggaagaatcagacgtggaaaaagcaatttctgag
gttacagaagttcagatgaaaaatatccaggacaagcttatcaattttgaggatttagac
gtgctaatggaaaaagaacgccagcagttggagcaaacgaagagtttgtttttccttgat
cagctcaatcttttatttcgtaaaacatctgcaccaacgaccggagaaggcaatcatgta
aaaaggaattga
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