Medicago truncatula (barrel medic): 11417538
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Entry
11417538 CDS
T01716
Name
(RefSeq) homeobox-leucine zipper protein HDG2 isoform X3
KO
K09338
homeobox-leucine zipper protein
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11417538
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
11417538
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DciA_cyano_C
HTH_Tnp_1
MRP-L20
Motif
Other DBs
NCBI-GeneID:
11417538
NCBI-ProteinID:
XP_003596999
UniProt:
G7IKH9
LinkDB
All DBs
Position
2:complement(43404059..43411142)
Genome browser
AA seq
737 aa
AA seq
DB search
MFQPNLMEAGQHHQLLPFDMTQNNNNTSESDVPRIREDELFDSATKSGNSENQEAANSGE
DQEPRAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT
QMKTQQERHENTSLRTENEKLRADNMRFREALSNASCPNCGGPTAIGEMSFDEHHLRIEN
SRLREEIDRISAIAAKYVGKPVVSYPLLSPSSVPPRPLELGIGGFGGQPGMGGDMYGAGD
LLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLWLPTLEGGSILNEEEYVRSFPRG
IGPKPAGFKCEASRESSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGN
YNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARSRRRP
SGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLAS
AMATNIPTVDVGVITNQDGRKSMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRVM
TRKSVDDPGRPAGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIA
NGRDTGNCVSLLRVNSANSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDY
VALLPSGFAILPDGTTTNGGGVGETGHGGGSLLTVAFQILVDSVPTAKLSLGSVATVNNL
IACTVERIKASLSGEVA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttccagccaaatctaatggaagctggacaacatcatcaacttctaccatttgacatg
acacaaaacaacaataatacttcagaaagtgatgttccaagaatccgtgaagatgaatta
ttcgacagtgctacgaaatctggtaacagtgaaaatcaagaagctgctaattctggtgaa
gatcaagaacctcgtgctaagaagaaacgttatcaccgtcatacacagcatcagatccaa
gaaatggaagcgttttttaaggaatgtccacaccctgatgacaagcaaaggaaggaacta
agcagagagttagggttagagccattgcaagtgaagttttggtttcagaacaaacgtact
caaatgaagactcaacaggagaggcatgagaatacttcacttagaactgaaaatgagaaa
cttcgcgctgataacatgaggtttagagaagctctaagtaatgcttcttgtcctaattgt
ggtggaccaactgctatcggagaaatgtcgtttgatgaacatcacttgaggattgaaaat
tctcgccttcgagaagagattgataggatatctgccattgctgccaagtacgtagggaag
ccagtggtgagctatccactcctctccccttcatcggttcctcctcgtcctctagaactc
ggcattggtggtttcggaggacaaccaggaatgggaggagatatgtatggagctggagat
cttcttagatcaataagtggaccgaccgaagccgataaaccgatgataattgagctagct
gttgctgctatggaggaactcattggaatggcacaaatgggtgatccactttggttgcct
acacttgaaggaggttccatactcaatgaggaggaatatgttaggtcttttcctagagga
attggtccaaaaccagctggttttaaatgtgaagcttcaagagaatcttctgttgtcatc
atgaatcatgttaaccttgttgagattctcatggatgtgaaccaatggtccacagttttt
tctggcattgtctcaagagcaatgacattggaagtgctatcaactggggtggcagggaac
tacaatggtgcattacaagtgatgacagcagaactgcaagtaccttcaccacttgtgcca
actagagagagttattttgtaaggtattgtaagcaacatgctgatggaacttgggcagta
gtggatgtttctttggacaatttacgccctagtccttctgccagatcaagaagaaggcct
tctggttgcttaattcaagaaatgcccaatggctactcaaaggttatatgggttgagcat
gttgaagtggatgatagaggtgttcataatctatacaagcagcttgttagttctggacat
gcatttggtgcaaaacgttggattgcaaccctagatcgacaatgtgaaagacttgctagt
gccatggcaacaaacattcccacggtcgatgttggcgtgataacaaaccaagatgggaga
aagagtatgttgaaactagctgaaagaatgtgtataagcttttgtgctggagtgagtgcc
tcaacagcacacacgtggacaacactttcgggtacaggagctgatgatgtaagggtcatg
acccgtaagagtgtagatgacccaggaagaccagctggcattgttctaagtgctgcaact
tctttttggcttccagtgccaccaaaaagagtttttgaatttcttagagatgaaaactca
agaagtgagtgggatatcctttccaatggtggagttgtccaagaaatggcacatattgct
aatggaagagatactggaaattgtgtttctctacttcgagtgaatagtgcaaattcaagc
caaagcaacatgttgatattgcaagagagttgtacggatacaacagggtcatttgtgata
tatgcacctgtagacatagttgcaatgaatgtggttctaaatggaggggatccagattat
gtagcacttcttccatctggatttgctatactaccagatgggacaaccacaaatggagga
ggtgttggtgaaactggacatggtggtggatctctattgactgttgcatttcaaatattg
gtcgattccgttccaacggcaaaactttctcttggatctgttgctacggttaataatctt
attgcttgtactgttgagaggattaaggcttctttgtctggtgaagttgcttga
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