Medicago truncatula (barrel medic): 11417779
Help
Entry
11417779 CDS
T01716
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
11417779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11417779
03110 Chaperones and folding catalysts [BR:
mtr03110
]
11417779
03029 Mitochondrial biogenesis [BR:
mtr03029
]
11417779
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
11417779
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
11417779
Messenger RNA biogenesis [BR:
mtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
11417779
Chaperones and folding catalysts [BR:
mtr03110
]
Heat shock proteins
HSP60 / Chaperonin
11417779
Mitochondrial biogenesis [BR:
mtr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
11417779
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
11417779
Exosomal proteins of other body fluids (saliva and urine)
11417779
Exosomal proteins of breast cancer cells
11417779
Exosomal proteins of colorectal cancer cells
11417779
Exosomal proteins of bladder cancer cells
11417779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8844
Motif
Other DBs
NCBI-GeneID:
11417779
NCBI-ProteinID:
XP_003591643
UniProt:
Q1RSH3
LinkDB
All DBs
Position
1:complement(44212593..44217670)
Genome browser
AA seq
574 aa
AA seq
DB search
MYRFASSLASKARIARSNANQIGSRVAWSRNYAAKEIKFGVEARALMLKGVEELAEAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGINMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGDREIGELIAKAMEKVGKEGVITIADGKTLQNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLIIIHEKKISNINSIVKVLELALKKQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGGQLITEELGMNLEKVDLEMFGSCKKITISKDD
TVILDGAGDKKSIEERCEQIRSAVENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASNELSKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVSELPKEDKDTPAMPGMGGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgatttgcttcatcacttgcctccaaagctcgaattgctaggagcaacgctaat
cagattggaagtagggtggcatggagcagaaattatgctgccaaagagatcaaatttggc
gtggaggctcgtgctttgatgcttaagggtgttgaagaacttgctgaggcagttaaagta
accatgggtcctaagggccgtaatgtggtgattgagcaaagctttggtgcccctaaagtg
acaaaagatggagtcactgtggctaagagcattgaattcaaggataaagtcaagaatatt
ggtgccagtcttgtaaagcaggttgcaaatgctaccaatgatgtcgctggtgatggaacc
acttgtgctactgttcttacccgagcaatatttacggaaggatgcaaatcagtagcagct
ggaatgaatgcaatggacctgaggcgaggtataaatatggctgttgatgctgttgtgaca
aacttgaaaagcagagcacgaatgatcagcacttctgaagaaatagctcaggttggcaca
atatctgctaatggggatagagaaattggtgagttaattgcaaaagccatggagaaagtt
ggcaaagaaggtgtaatcacaattgctgatggcaagacattgcaaaatgagttggaagtt
gttgaaggaatgaagcttgaccgaggctacatttctccgtatttcataacaaaccagaag
aaccagaaatgtgaactcgaggatcccctcattataatccatgagaagaagatctcaaat
ataaattctatagttaaagtattagagttagctttgaagaaacaaagacctttattgatt
gttgctgaggatgtggaaagtgatgcccttgcaactcttattctaaataagcttcgtgct
ggaattaaggtatgcgcgatcaaagcccctggttttggggaaaacaggaaatctggtctc
caggatctcgctgttcttacaggaggtcaacttatcactgaagagctcggcatgaatctt
gaaaaagttgatcttgaaatgtttggctcttgcaaaaagattacaatttctaaagatgac
actgtcattcttgatggagccggtgataagaaatcaattgaggaaagatgtgagcagatt
aggtcggcagtcgaaaatagcacttcagattatgacaaggaaaaattacaggaaagattg
gccaagctttctggaggagttgcggtgcttaagattggaggagccagtgaggctgaagtt
ggtgagaaaaaagacagagtaacagatgccttaaatgcaaccaaggcagctgtagaggag
ggcatagtacctggtggtggtgttgcacttctttatgcatcaaatgagttaagtaagctt
ccaaccgccaattttgatcagaagataggtgtccaaattatccaaaatgctttaaagaca
cctgtgcatacaattgcatcaaatgctggagtcgagggtgctgttgttgttggtaaactt
ttggaacaggataatcctgatcttggttacgatgccgccaaaggtgaatatgttgatatg
gttaaatctggaataattgatccattgaaggtgattaggaccgccttggttgacgcagcc
agtgtgtcgtctttgatgacaacaactgaagctgtcgtttctgaactcccaaaagaagat
aaagatactcctgccatgcctggtatgggtggtatggactattag
DBGET
integrated database retrieval system
