Medicago truncatula (barrel medic): 11417818
Help
Entry
11417818 CDS
T01716
Name
(RefSeq) splicing factor 3A subunit 2
KO
K13210
far upstream element-binding protein
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11417818
03041 Spliceosome [BR:
mtr03041
]
11417818
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
11417818
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
11417818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
MtxA_C
Motif
Other DBs
NCBI-GeneID:
11417818
NCBI-ProteinID:
XP_024627050
LinkDB
All DBs
Position
7:complement(2749998..2758498)
Genome browser
AA seq
630 aa
AA seq
DB search
MCVYTAIFILFLLPESNHNENQVLHNLLSFSIFKLISLSLSLLHNLMAEEEVIVAAPDCK
RKFEDQHSDDGENKRPCLYDDNQNYLANTNIHQEKKVVEPEENAHSEEIQDESKDNSEET
AEPTDTKEIHVEEPSKSIEQLDSSSIDPTFQHDASFGQKQPISGSDTTTTQEIEVPSNKE
FNLKDLLESIYEFENLMDAMFTEADDVDSPAREVPNEKEFNLNDFLESIDKAEKLLNAMS
AEDDDGGSPTLVARGLSPAQAIMGSDQIQIQVPNEKLIPQHLPDDSKERTVQVTGDKRQI
EIAQEMIKETLNQPVKSSSGVFSQQAYRPPQGSGGPPLWDQQGSHYGHPPSYYYQHHWPY
PSHNQSYAPTPYGNYPQHMAPRSSYGSGWEQRPHQSLQGPPSHNWGYDHYGGQRGHSSEV
SSSAPHPSSIPQHCTGPYPLPSIGPSPVQMNYNYENLAPAQYPYGRHSTYPQAWAQANHA
PPQQYGKPPLYGVPPSQGQHPQAYVHPRATQPGEIPYQGSTPAQSYGRPPLFGMPPSQGQ
HPESYGPPRATQPGEIPYHGSTPAQIYCRPPFYGMPPSQGQHPQSYGPPRATQPGKIPYQ
GSTPAQSHGRPPSYGVPPSQGQHPVLWRPP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtatacagcaattttcatactttttctcttgccagaatctaaccacaacgag
aatcaggttctgcataatcttctttctttttcaattttcaaactcatctctctctctctc
tcattactgcataatcttatggccgaagaagaagtgattgttgcagcacccgattgtaag
cgaaagtttgaagatcaacactctgatgacggtgagaacaagcgtccttgtctttacgac
gataaccagaattacctagctaatactaatatacatcaagaaaagaaggttgttgagcca
gaggaaaatgctcattctgaggaaattcaagatgaatctaaagataattcagaagaaacg
gctgagcctaccgataccaaagagattcatgttgaggagccatctaaatcaattgaacaa
cttgattccagctcaattgatcccacctttcagcatgatgcttcttttggacaaaagcaa
cctatatccgggtctgacacaacaaccacacaagaaattgaggttcctagcaataaggag
ttcaatttgaaggatcttttggaaagtatatatgagttcgaaaacttaatggatgccatg
ttcacagaggctgatgatgtggattctcctgcacgtgaagttccaaatgagaaggagttc
aacttgaatgattttttggaaagtatagataaggcagaaaagctattgaatgccatgagt
gcagaggatgatgatggaggttctcccacacttgtagctcgaggcctctcccctgctcag
gctatcatgggatctgatcaaattcagatacaagttccaaatgagaaattgatacctcaa
catcttcccgatgattctaaagaaaggactgtccaagttactggtgataagaggcaaatt
gaaattgcacaagaaatgataaaggaaaccttgaaccagcctgtcaagtcgtcatcaggt
gttttcagccagcaggcctaccgtccgccacaaggatctggtggtccaccactatgggat
cagcaaggttcacattatggccacccaccatcatattactatcagcaccactggccatat
ccctctcataatcaatcatatgcacctactccttatggaaattatcctcaacatatggct
ccaaggagcagttacggttctggttgggagcaaaggcctcaccagagtttgcaggggccg
ccctcacacaactggggttatgatcattatggtggacaaaggggtcattcatctgaagtt
tcatcatctgccccgcatcccagttcaatcccccaacactgtaccggtccttatccttta
ccctccataggtccatccccagttcagatgaattacaattatgaaaaccttgcccctgca
caatatccatatggaagacattcaacctaccctcaagcctgggctcaagcaaatcatgca
cctccacagcagtatggcaagccaccattgtatggcgtgccaccttcacaaggacagcat
ccacaggcttatgtccaccctagagccactcaaccaggcgagattccgtatcagggttct
actccagcacaatcatatggcaggccaccattgtttggcatgccaccttcacaaggacaa
catccagagtcttatggccccccaagagccactcaaccaggcgagattccgtaccatggt
tctactccagcacaaatatattgcaggccaccattctatggcatgccaccttcacaagga
caacatccacagtcttatggcccccctagagccactcaaccaggcaagattccgtatcag
ggttctactccagcacaatcacatggcaggccaccatcgtatggcgtgccaccttcacaa
ggacaacatccagtcttatggcggccaccctag
DBGET
integrated database retrieval system
