Medicago truncatula (barrel medic): 11417846
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Entry
11417846 CDS
T01716
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11417846
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
11417846
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Ortholog
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_ACIN1
RBD_AKAP-17A
RRM_3
Motif
Other DBs
NCBI-GeneID:
11417846
NCBI-ProteinID:
XP_003592082
UniProt:
G7IBX9
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All DBs
Position
1:complement(48002007..48008637)
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AA seq
443 aa
AA seq
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MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVSALHF
YGNTQPSIRGRNVYVQFSSHQELTTIDQSQGRGDEPNRILLVTIHHVLYPITVDVLYQVF
SPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRNIYDGCCQLDIQFSNLDELQ
VNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMYGVQGSGPRTVGYPQMPNAAAIAAA
FGGGLPPGITGTNDRCTLLVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALIQM
GDGFQAELAVHFLKGAMLFDKRLEVNFSKHPNITQGADTHDYSNSNLNRFNRNAAKNYRY
CCSPTKMIHLSTLPQDITEDEIVTLLEEHGTIVNSKVFEMNGKKQGLVQFETEDQATEAL
VCKHATSLSGSVIRISYSQLQNI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccttccaaagtcatccacgttcgaaatgtggggcacgaaatatccgaaaat
gatttacttcagttatttcaaccttttggagtcattacaaagcttgtaatgttacgtgcc
aaaaatcaggcacttatccaaatgcaagatgttccttctgcagttagtgctttacatttt
tatggaaacactcagccaagcataagggggaggaatgtttatgtccagttttcatctcat
caagagctaacaacaatagatcaaagtcaaggacgaggagatgagccaaaccgaattctc
ttagttacaattcatcacgtgctctatcccataacagtggatgtactgtatcaagttttt
tctcctcatggatctgtggaaaagatcgtgacatttcagaagtcagctggctttcaggct
ctcatccagtatcaatcacaacagagttctattactgcaagaactgcacttcagggtcgc
aatatttatgatggttgctgtcagctggacattcaattctcaaaccttgatgaattacaa
gtgaattataataatgaccgttcaagagacttcacaaacccaaatctccctacagaacag
aaaggcaggcctccacaacttggatatggtgatgcaggaaacatgtatggtgttcagggt
tctggacccaggacagtcggatatccacagatgcccaatgctgcggccattgcagctgct
tttgggggaggtttgcctcctggaataactgggacaaatgataggtgtacacttcttgtc
tcaaatcttaatcctgatagaattgatgaagacaaactgttcaacttgttctccctttat
ggaaacattgtgagaattaaacttctacggaacaaaccagatcatgcacttatccagatg
ggagatggtttccaagctgaactggctgtacactttctgaagggagccatgttgtttgat
aagcgactagaggtcaacttctcgaagcatccaaacataacacaaggtgctgacacacac
gactacagcaactcaaatctcaaccgttttaatcgtaacgctgctaaaaactaccgctat
tgctgctccccaacgaagatgattcatttgtccacactcccacaagacatcactgaagat
gagattgtgacccttctagaggagcatggaaccattgtcaatagcaaagtatttgagatg
aatgggaagaaacaaggtctggttcagtttgagactgaggatcaggctactgaagccctt
gtgtgcaagcatgctacctcactttctggctcggtaattcggatctcctattctcaattg
cagaatatatga
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