Medicago truncatula (barrel medic): 11417848
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Entry
11417848 CDS
T01716
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X2
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11417848
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11417848
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
11417848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
UIM_2
SVIP
Motif
Other DBs
NCBI-GeneID:
11417848
NCBI-ProteinID:
XP_003592118
UniProt:
G7ICZ5
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Position
1:48231444..48238875
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AA seq
619 aa
AA seq
DB search
MADQGEDEDLQMAIRMSMTPEPKRNKPRDEVAGVVSGLPEDSPESKTRRRELMAAAAEKR
MAAVVRVSPLPSRLPASPSPAVKEEKKGGEVGIVKREEELVFKGESFSKELSAEEANKLF
VMVFGSEVSKGILAQWCNQGIRFSSDPETSMGLVQHEGGPCGVLATIQAFVLKYIIFFSD
ELKELSRMPQNRGLGVSSKSHPAPSYNISSLTDGVKVRALVRSMGEILFSCGNNKRAVIA
TLSIPGNDSQRFEGISEEEVIASSLKALSIDSALDLLKVLRVETHTSETTALQRLEANIP
LFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGQAVPNV
FDGRMDLGGGMFLKGISRTVEVGFLTLLESLNFCKVGQFLKTPKWPIWVVGSESHYTVLF
ALDPTVQNENELEGRETQIRKAFDAQDQSGGGGFISVEGFHQVIRETNIKLPADKLDNLC
SAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLFHFNGIAKSDLNGSQVSFGGET
PLQRPRLTKLSVSVPPRWTPEEFMTNVQGPSASGASDSAGKDTEVSKPEPTQHAPLVDCI
RTRWARAVCSWSGDPPSIV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaaggagaagatgaggatttgcaaatggcgattcggatgagtatgacgccg
gagccaaagcggaataaaccgagagacgaagttgctggtgttgtttcggggttgccggag
gattcaccggaatctaagacgcggagacgggagcttatggctgcggctgctgagaagcgg
atggcagcggttgttagggtttctcctttgccttcacgtttaccggcttcaccgtcgccg
gcagttaaagaagagaagaagggtggggaagttggaattgtaaagagggaagaggagttg
gttttcaaaggtgaaagctttagtaaggaactttctgcggaagaagctaataaattgttt
gttatggtgtttggaagtgaagtttcgaagggcattctagcacaatggtgtaaccaagga
ataaggtttagctctgatcctgaaacatcaatgggcctagtgcagcatgaaggaggcccc
tgtggcgttttggcaactatacaggcattcgtgctcaaatatattattttcttcagcgat
gaattgaaagaattgtcacgcatgccacagaatcgaggtctgggtgtgtcaagtaaaagt
cacccagctccatcatataatatttcgtcactcactgatggtgtaaaagtaagagccctg
gtaagaagtatgggtgaaattttattttcatgtggaaataataaaagggctgtgattgca
actttgagcattccagggaatgatagtcaacgttttgaaggaatctcagaggaggaggtt
attgcaagctcacttaaagctctttctattgattctgccttggatttgctgaaagttctt
agagttgaaacacacacatcagaaacaactgctttacagaggcttgaagcaaatattcct
ttattccaaagtcgtatgggggcattgcttttcctaatctctgctttactttctcgcgga
ctggatttggttcaaagtgacagggatgatcccagcctaccattggttactgctcctttt
gggcatgcctcccaggaaattgtaaacctgctactctgtgggcaggctgtccctaatgta
tttgatggaaggatggatttgggtgggggaatgtttctaaaaggtatatcccgaactgtg
gaagttggatttctcaccctgcttgagtccctgaatttctgcaaggttggtcagtttctg
aaaaccccaaaatggcctatatgggttgttgggagtgaatcccattacacagtgttgttt
gctcttgatcccaccgttcaaaatgagaatgaactggaaggaagggagacacagattcgc
aaagcttttgatgcccaagatcaaagtggaggtggcggcttcattagtgttgaggggttc
catcaagtcatcagagaaacaaatatcaaacttccggcagataagctagataacctttgc
agtgcagggttcattgtatggagtgaattctggcaggtaattttggacctggacaaaagc
ttgggaggtttgaaagattcatcaggattgatgggtaagaaggtctttgaccttttccat
tttaatgggattgctaaatcagatttgaatggcagtcaagtaagttttgggggtgaaact
ccactgcaaagacccaggctcacaaaattaagcgtctcagttcccccaaggtggacacct
gaggaatttatgacaaatgtgcaaggtccatctgcttccggtgcaagtgactctgctggg
aaggacacagaagtatctaaaccagagcctactcagcatgcgcctttggttgactgcata
agaacacgctgggcccgtgctgtctgcagctggtcaggtgatcctcctagtatagtctga
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