Medicago truncatula (barrel medic): 11418234
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Entry
11418234 CDS
T01716
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11418234
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
11418234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
AAA_18
AAA_14
AAA_30
nSTAND3
ATPase_2
Viral_helicase1
NPHP3_N
AAA_2
NACHT
AAA_28
Cytidylate_kin
RNA_helicase
TIP49
TsaE
ABC_tran
AAA_5
DUF815
AAA_24
RuvB_N
AAA_11
AAA_33
Rad17
AAA_17
AAA_7
KAP_NTPase
IstB_IS21
NB-ARC
bpMoxR
nSTAND1
AAA_19
AAA_3
PduV-EutP
nSTAND6
Mg_chelatase
SLFN-g3_helicase
ResIII
Sigma54_activat
Cytidylate_kin2
CPT
SRPRB
SPC25
NTPase_1
AAA_13
Motif
Other DBs
NCBI-GeneID:
11418234
NCBI-ProteinID:
XP_003601182
UniProt:
G7J4A8
LinkDB
All DBs
Position
3:complement(38026420..38032370)
Genome browser
AA seq
461 aa
AA seq
DB search
MSSSSPSPMETEQNPTTDQNGAVASQRSPLPPSPPPPLPPEDKILVPVEVCLKPSSTASI
HDVRSAVEGMLEKRSLSYNGGPIPVPLDEPFLADNVQRICVCDTGEGMQNDNVLLFWQVK
PVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASA
LLFTEKAVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQAQLVEVNAHS
LFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRV
VNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQ
ELMRTGILTNFEDCKNIMLPNYASAKQRMNAPDFHEATTFMQLCKKLVETAEACEGMSGR
SLRKLPFLAHAALANPFDCNPIKFLCTMIDTAKRERSELPD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagttctcctagtccaatggagacggagcaaaaccctacgaccgaccaaaac
ggcgccgtagcttcccaacgttcacctctaccaccatctccccctcctcctcttccaccg
gaggataaaattctcgtccctgtcgaggtttgcttaaaaccttccagcacagcttccatt
cacgatgttcgttccgccgttgaggggatgcttgaaaagaggagtttgagctataatggt
ggaccgattcctgttccccttgacgaaccctttcttgcagataatgtgcaaagaatttgc
gtttgtgatacaggtgaagggatgcagaatgataacgttcttttgttctggcaagtcaag
cctgttgtacatgtctttcagcttagcgaagaaggaccgtgtgaggatatcagctctgat
ggccagtcttctagcttcaatgaatggattcttcctgcaaaagaatttgatggcatgtgg
gaaagcctaatatatgaatctggtctaaagcaaaggttgctacggtatgcagcgagtgct
ttgctcttcactgaaaaggcagttgacccattccttgtttcatggaaccgcataattctt
ttgcatggaccccctgggactggaaagacgtctttatgtaaagcattagctcagaaactg
tcaattcgattcaattcaagattcccacaggctcagcttgttgaagtgaatgcacattct
ttgttcagtaaatggttctccgaaagcggaaagctggtagcaaaacttttccaaaagatt
caagaaatggtagaggaagaaggcaatctggtatttgttttgatcgatgaagtcgaaagt
cttgctgctgccagaaaagctgctttgtctggttctgaaccttctgattctattcgggtt
gtcaatgcattattaactcagatggataagttaaaatcatctccaaatgttataattcta
acaacatccaacatcactgctgctatcgatattgcttttgttgatcgagctgatatcaaa
gcatatgttggcccaccaactcttcaagcccggtatgaaatattaaggtcttgtgtgcag
gaacttatgcgtacagggatattaactaattttgaggattgtaagaatatcatgctgcca
aattacgctagtgcaaaacagagaatgaacgcaccagattttcatgaagctactacattc
atgcaactgtgcaagaaactagttgaaactgcagaggcatgcgagggaatgagtggaagg
tctctcagaaagcttccgtttttggcacatgctgcacttgcaaatccttttgattgcaac
cctatcaagttcttatgtacaatgatagatacagcaaagagggagcgttctgagcttcct
gactaa
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