Medicago truncatula (barrel medic): 11418493
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Entry
11418493 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
11418493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11418493
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11418493
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
11418493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
zf-Di19
FAIM1
Motif
Other DBs
NCBI-GeneID:
11418493
NCBI-ProteinID:
XP_003625295
UniProt:
G7KWA3
LinkDB
All DBs
Position
7:44069248..44073058
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AA seq
310 aa
AA seq
DB search
MAPGGGIFKEVLESHLLTSDYETGKAKSEAKINSTLTKSTSVGLNGKHGTSSKNGVHDLL
GCPVCKNLMYPPIYQCPNGHTLCSNCKIEVHNLCPTCHHDLGNIRCLALEKVAESLELPC
RYQSLGCNDIFPYYAKLKHEQNCGFRPYNCPYAGSECSVMGDIPNLVDHLKDEHKVDMHD
GFTFNHRYVKTNPHEVENATWMLTVFNCYGKHFCLHFEAFQLGTAPVFMAFLRFMGDDNE
SKKFSYSLEVGAYGRKLIWQGIPRSIRDSHGKVRDSQDGLIIQRNQALYFSGGDKKELKL
RITGRIWKED
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggaggtattttcaaagaagttctcgagtctcacctcttgacttcagat
tatgaaacaggcaaggctaaatctgaggccaagattaacagtacacttacaaaatccact
agtgttggattgaatggaaagcacggaactagttcaaagaatggtgtgcatgatttactc
gggtgccctgtctgcaagaatttgatgtatcctccaatttaccagtgtccaaatggccat
acattatgttcaaattgtaagattgaagtccataatctctgtcccacctgtcaccatgat
cttgggaatataaggtgtttggctctggagaaagtggcggaatctttggagcttccttgc
agatatcagagtctagggtgtaatgatattttcccttactatgctaagcttaagcatgag
caaaattgtggatttcgtccatacaattgtccgtacgctggatctgagtgctctgtgatg
ggtgacattccaaatcttgttgatcatctcaaggatgaacacaaggttgacatgcatgat
ggattcaccttcaatcatcgatatgtcaaaacaaacccacatgaagttgaaaatgccaca
tggatgctcactgttttcaattgctatggaaagcatttctgtttgcactttgaggctttc
cagcttggtacagctccagtttttatggccttcttacggtttatgggcgatgacaacgaa
tcaaaaaaattcagttacagcttagaagtcggtgcatatgggcgcaaacttatatggcaa
ggaattcctaggagcatacgcgacagtcatggtaaagttagagatagtcaagatggacta
ataattcagaggaatcaagccctttatttttcgggtggggataaaaaggagttgaaattg
agaatcactggtcgtatatggaaagaagattga
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