Medicago truncatula (barrel medic): 11418533
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Entry
11418533 CDS
T01716
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
11418533
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
11418533
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
11418533
NCBI-ProteinID:
XP_003628880
UniProt:
G7LIJ0
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Position
8:complement(30883275..30890324)
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AA seq
685 aa
AA seq
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MMKMNVLSMKNNNVIFFWWFGMIVKFCFLLCACSQNTSLRGGLKKINNLGSTVVVKLNTE
NKQQLVVDNGIVSVTLSKPEGYLIGISYNGIDNILESEYKEHARGYFDVVWNELGKHGKV
QRIHGTKFSVIVANENMVEVSFLRSWTSSMTGIDVPINIDIRYIFRRGDSGFYSYAIFDR
HEGMPAVKVDQIRFVFRLNKDRFNYMALSDTRQRRMPTMRDVKTGQVLAYPEAVLLTKPH
NPQFTGEVDDKYQYSCENINNTVHGWISLDSDPTVGFWMITPSNEFRNGGPIKQDLTSHA
GPITLSMFVSPHYAGKDVTMEFEEGETYKKVFGPIFVYLNTASSENDNATLWSDAVQQFS
KEVQSWPYDFPQSKDYFPPNQRGAVFGRLLVQDWYFKGGRFQYTNNAYVGLALPGDAGSW
QTESKGYQFWTRANAKGYFKITNAVPGDYNLYAWVPGFIGDYKYNATITITPGGVIKLNS
LVYNPPRNGPTIWEIGIPDRLASEFHIPDPYPTLMNKLYTKKHSDKFRQYGLWKRYSDIY
PNDDLVYTVGVNNYRDWFFAHVTRSTGNKTYEPTTWQIIFEHKNDIISGNYTLQLALASA
ADSNLQVRFNDRSKDPPHFATGRIGRDNAIARHGIHGLYRLFSINVSSNLLVKGKNIIYL
RQSKADTPFQGVMYDYIRLERPPAI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagatgaacgtgttgagtatgaagaacaataatgttatcttcttttggtggttt
ggaatgattgtgaagttctgtttcttgctatgtgcttgttctcagaatacatcattaaga
ggaggtttgaagaagatcaataacctgggatccacagttgtagtcaagctgaatacagaa
aacaaacagcagttagttgttgacaatggcattgtttctgtcactttgtcaaagccggag
ggatacctcattgggatatcatataatggaattgacaatattcttgaatctgaatacaaa
gaacatgctagagggtacttcgacgttgtttggaatgaactggggaagcatggaaaagtc
caaagaatccatgggacaaaattttcagttatagtagctaatgagaatatggtggaggtt
tcatttttaagatcatggacatcttccatgactggcatagatgttcccataaacatcgat
atcagatacattttcagaagaggtgattccggattttattcatacgcaatatttgatcgc
catgaaggaatgccagcagttaaggttgatcaaattagatttgttttcagactcaataaa
gacaggttcaactacatggctctatcggatacaaggcaaagaaggatgccaacaatgaga
gatgttaaaacaggtcaagttttagcttaccctgaagcagttctattaaccaaaccacat
aacccacaatttacaggagaggtggatgataaatatcaatactcatgtgagaacataaat
aacacagttcatggatggattagtcttgattctgatccgaccgtgggtttctggatgata
acaccaagtaatgagtttcgcaatggtggacccattaaacaagaccttacttctcatgct
ggacctatcaccctctcaatgtttgtgagtccccactatgctggaaaggatgtaaccatg
gaatttgaagaaggggagacttataaaaaggtgtttgggcctatatttgtctaccttaac
actgcttcaagtgagaatgataatgcaactctctggtcagatgctgtacaacagttttcc
aaggaagtccaaagttggccttatgattttcctcaatcaaaagactactttccacctaat
caaagaggagcagtatttggaagattactagtccaagattggtacttcaaaggaggaaga
tttcaatatactaataatgcttatgtgggtctagctttgcctggagatgcaggatcatgg
caaacagaaagcaagggctatcaattttggactcgagctaacgccaaaggatactttaaa
ataactaatgctgtgccaggtgactataatttgtatgcttgggtccctggatttattggt
gattacaaatataatgctacaatcactatcaccccaggaggagttataaaattaaattca
cttgtatataatcctcccagaaatggaccaaccatttgggaaattggtatcccagatcga
ttggcttcagaatttcatataccagacccttaccctactctcatgaacaaattatacacc
aaaaaacacagtgacaagtttaggcaatatggattgtggaaacgttacagtgatatatat
ccaaatgatgatcttgtttacactgtgggtgttaacaattatagggattggttttttgct
catgttacaagaagcacaggaaataaaacatatgaaccaacaacatggcagattatattt
gaacataaaaatgacataatcagtggaaactacacacttcaactggccttagctagtgct
gctgattctaacctacaggttcgtttcaatgaccgcagcaaagatccacctcattttgcc
acagggcgtataggaagagataatgccatagcaaggcatggaattcatggattgtatcgg
ctgttcagcattaatgtgtctagtaaccttcttgtgaaaggaaagaacatcatctacctg
aggcagtccaaagccgatactcctttccaaggagttatgtacgattatattcgtttagaa
cgaccaccggcaatttga
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