Medicago truncatula (barrel medic): 11418807
Help
Entry
11418807 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
11418807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11418807
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11418807
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
11418807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
FAIM1
Motif
Other DBs
NCBI-GeneID:
11418807
NCBI-ProteinID:
XP_003598630
UniProt:
A8W462
LinkDB
All DBs
Position
3:complement(5188949..5192908)
Genome browser
AA seq
304 aa
AA seq
DB search
MTSSNPFFDDIRSRPGVDPPQTEESTEIPELVNDPIQTVVKPNGTVSSSVRELLECPVCL
NAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGNIRCLALEKVAASLELPCKYQGFG
CIGIYPYYSKLKHESQCVFRPYNCPYAGSECAVVGDVQFLVDHLKDDHKVDMHSGCTFNH
RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDDQAKNYTY
SLEVGGNGRKMTWQGVPRSIRESHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacatctagtaatcctttctttgatgatatacggagcagacctggggttgatcctcct
caaactgaagagtcaacagaaattcctgaactcgtaaatgatcctatacagactgttgtt
aaacctaatgggactgtttcaagcagtgttcgtgagcttttagagtgccctgtgtgcttg
aatgctatgtaccctccaatccaccagtgctcaaatggtcacactctatgctctggttgc
aaaccaagagtccatgaccggtgccctacttgtcggcatgagctcggcaatattagatgt
ctggcattggagaaggtggctgcatcactagaacttccgtgtaaatatcaaggttttggg
tgcataggcatatacccatattacagcaagctaaaacatgagtctcaatgtgtgtttaga
ccctataactgtccatatgctggctcagaatgtgctgtcgtcggtgatgtacagttcttg
gtggatcacctgaaagatgatcacaaagttgacatgcatagtggctgcacttttaatcat
cgttacgtcaaatcaaatcctcaagaagttgaaaatgccacatggatgttaacggttttt
agttgcttcggtcagtatttttgcctgcattttgaagcttttcaactgggaatggctcct
gtctacatagcatttttgcggtttatgggcgatgatgatcaggcaaaaaactatacctac
agtcttgaggtaggtggtaatgggagaaagatgacatggcagggagtgcctagaagcatt
agggaaagccaccgcaaggttcgcgacagttttgatggtctcatcattcagaggaacatg
gctctcttcttttctgggggtgataggaaggaattgaagctacgagttaccggaaggatt
tggaaagagcagtga
DBGET
integrated database retrieval system
