Medicago truncatula (barrel medic): 11418924
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Entry
11418924 CDS
T01716
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11418924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11418924
03036 Chromosome and associated proteins [BR:
mtr03036
]
11418924
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11418924
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
11418924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
11418924
NCBI-ProteinID:
XP_003627350
UniProt:
G7L8A5
LinkDB
All DBs
Position
8:7673809..7692386
Genome browser
AA seq
1081 aa
AA seq
DB search
MEEEMAMDSPFFDPQDLTTREKFRRYGKRHLNSGASVEQDYSASKLSESGLFYDGQNIHS
PTNAALILENIKQEVESLDADYLDDKSLYSSRKRSSADVPGIPGMDDGFDSVRYSLKACK
QEGDSLGDDADNIFNSFASLFDTSLTGMMPIPDLILRFENECRNVSESIRYGLNIRHRVV
EDKLMRQKAQLLLDEAATWSLLWFLYGEETEELSKEKILVKQTSHLMACEFVTEDHIAQL
CLRIVQWLEGLASKALDLEAKVRGSHVGSYLPSSGVWHHTQRYLNKGTSDRNVVHHLDFD
APTRENANILPDDKKQDESLLEDVWTLLRAGRLEEACGLCRSAGQPWRASSLCPFGGLNL
FPSVEALAKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKISELGGKYEAAVYAAQCS
NLRQMLPLCTDWESACWAMAKSWLDVQIDLEVTRSLPGGGVNQLGTFGDVMDRSPGQVDG
SFDPSNGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHETVTRQCKEQQRQIQMTLMLADI
PRVLDLIWSWIAPVEDDQNVFRPHGDPQMIRFGAHLVLVLRYLPEAREEMKGALMDKILT
VGDHILHLYAKFLFSKEHEELVGIYASQLARHRCIDLFVYMMEFRLHSSVHVKYKIFLSA
MEYLPFSLMDESKGCFEDIIERVLLRSREIKIGKYDNLSDVAEQHRQQSLEKAKVIQWLC
FTPPSTIANVKDVSKKLLLRALIHSNVLFREFALISMWRVPAMPIGAHTALGFLAEPLKQ
LAETLEISDDHNVFEDLREFEEWREYYSCDATYRNWLKIESENAEVPVSELSLEEKERAI
SAAKETLTASLSLLERRETHWLASIDNIYESAESVFLELHATAMLCLPSGDCLCPDATVC
TTLTSALYSSAGDEVVSNRQLVVNATISSRDHYCIDVVLRCLAIVGDGLRPHDFNDGGIL
STIIAAGFKGELPRFQAGVAMEISRLDAWYSDQDGNLEFPATYIVKGLCRRCCLPEVVLR
CMQVSVSLMGSGDQPDSHDNLIELVGSPETRFLDLFSQQQLQEFLLMEREYSICKLEHTQ
E
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaatggcaatggattctcctttcttcgatccacaagacctcaccactcgc
gagaagttccgcagatacgggaagaggcacttgaattcaggtgcctcagttgagcaagat
tactcggcttccaaattaagtgaaagtgggctgttttatgatggacaaaacatccatagt
cctactaatgctgcgcttattcttgaaaatattaaacaagaggttgagagtctcgatgct
gattacttggacgataagtctctgtattcctctagaaaaaggtcatcggctgatgttcct
ggaatccctggcatggatgatggttttgactctgtacgctattcgttaaaggcttgcaag
caagaaggcgactcgttgggagatgatgcagacaatatctttaattcatttgcttctctg
tttgatacctctttgacaggaatgatgcctattcctgatctgatactaagatttgaaaat
gagtgtcgaaacgtttcagaatctatcaggtatggcttgaacataaggcatcgagttgtt
gaggacaaattaatgaggcagaaggctcagctcctgcttgatgaagcggcaacatggtct
ctcttgtggttcctttatggggaagagacggaagagctttctaaagagaaaatactggtg
aaacaaacatcacatttaatggcttgtgaatttgttacggaggaccatatagctcaattg
tgcctcaggatagtccagtggttagaaggtttagcttctaaagcacttgacttggaagca
aaggttcgcggatcacatgtgggtagttatctccccagcagtggtgtttggcatcatact
caacgttacctaaataaaggaacttctgataggaatgttgttcatcacctggactttgat
gctccaactcgtgaaaatgcaaatattttgcctgatgacaaaaaacaagatgaatctctt
ctagaggatgtatggactcttctaagggctggaaggctagaagaggcgtgtggactttgc
cgttctgctggacagccatggagagcttcctctctgtgtccttttggaggtttgaacctg
tttccttctgttgaagctctggcgaagaatggtaaaaacaggactttgcaagctgttgaa
tttgaaagtggcattggtcatcagtggcatctttggaaatgggcttcctattgcgcatca
gagaaaatatcagagctaggtgggaaatatgaagcagctgtgtatgcagcccaatgcagc
aatctaagacagatgcttccactctgcacagattgggagtcagcatgctgggcaatggcg
aagtcttggctagatgtgcagatagacttggaagtcactcgttcactgccaggaggagga
gtcaatcaacttggaactttcggagatgtaatggaccgaagtcctggacaagttgatggc
tcctttgatccttctaatggacctgaaaattggccaattcaagttttgaatcaacagcca
cggcaactttcatctcttctgcaaaaacttcattcgggggaaatgatccatgaaactgtt
acacggcaatgcaaggagcaacaacgacaaattcagatgaccttaatgctagcggacata
ccacgtgtactagaccttatatggtcatggatagcacctgtggaagacgaccagaatgta
tttaggcctcatggagatcctcagatgatacgatttggtgcacatctagtacttgtgctt
agatatttgcccgaggcccgcgaggaaatgaagggtgctctcatggacaagattctgacc
gttggtgatcatattttacacctgtatgccaaatttctgttttcaaaggagcacgaggag
ttggtgggcatatatgcttctcagcttgcacgtcaccgttgcatagacctctttgtttac
atgatggaatttaggctacacagcagcgtacatgtcaaatacaagatattcctttctgct
atggaatacttaccattttctttgatggacgaatctaagggttgttttgaagacattatt
gagagagttctgttgagatctcgagagatcaagattggcaaatatgataacctgtcagat
gttgcagaacagcacagacagcagagtcttgaaaaagctaaagtcatccagtggctttgc
ttcacaccaccatcaacaattgctaatgtcaaagatgttagtaaaaaacttcttcttcga
gcattgatacatagcaatgtactcttcagggagtttgccttgatttctatgtggagagta
ccagcaatgcctataggtgcccacacagctcttggttttcttgctgagcccttgaaacaa
cttgcagagactcttgagatctccgatgatcataatgttttcgaggatctgagggagttc
gaagaatggcgggagtattactcctgtgatgcaacctaccgcaattggcttaaaattgaa
tccgagaatgcagaagttcctgtctctgagttgtcactagaggaaaaggaaagggctatt
tcagcagccaaggaaacactgactgcgtctctttcgctgctagaaagaagagaaacacac
tggctggcttctattgataatatatatgaatcagctgaatctgttttccttgaacttcat
gcaactgcaatgctctgcctgccatctggagattgtctgtgtccagatgctactgtatgc
accacactgacgagtgccctctattcttctgctggtgatgaggttgtctcaaatcggcag
ctagtggtgaatgccactatatcttcaagggaccactattgcattgatgttgttcttcgt
tgcttagcaatagtcggtgacggacttcgaccacatgatttcaatgacggtggcattctt
agcactattatagctgctggttttaaaggcgagcttcctcggtttcaggccggagttgca
atggaaatatcccgattggatgcttggtattctgaccaagatggcaacttagagttccct
gcaacatacattgtgaaaggactttgtcgaaggtgttgtctcccagaagtcgttcttcga
tgcatgcaagtttctgtttctctcatgggatcaggagaccagcctgattcccacgataac
ttgattgaactggttggcagtcctgaaactcgctttcttgacttgttcagtcaacagcaa
ttacaggagtttttattgatggagagggaatactcaatctgcaaactggagcatacacag
gaatga
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