Medicago truncatula (barrel medic): 11419396
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Entry
11419396 CDS
T01716
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03430
Mismatch repair
mtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
11419396
03460 Fanconi anemia pathway
11419396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11419396
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
11419396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
11419396
NCBI-ProteinID:
XP_003598062
UniProt:
G7J070
LinkDB
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Position
3:complement(411394..423609)
Genome browser
AA seq
719 aa
AA seq
DB search
MESPPKIQRLAESVVNRIAAGEVIQRPVSAVKELVENSLDAASTSINLTIKDGGLKLIQV
SDDGHGIRREDLPILCERHTTSKLSAFEDLQRITSMGFRGEALASMTYVAHVTVTTITKG
QLHGYRVSYRDGVMEQEPRPCAAVKGTQIMVENLFYNMAARKKTLQNSSDDYSKIVDVVS
RFAIHHTNVSFSCRKHGAVKADVHTVATSSRLDAIRTVYGVSAAHNLIEVQASDNDPSSS
IFEMHGYVSNANYAAKKITMVLFINDRLVEWSALKRAIEIVYAATFPKASKPFIYISIVL
PPENIDVNVHPTKREVSLLNQEVVIEKIQLVIESTLRNSNDARTFQEQTAGQFSTSRTNK
SKEVNLSPTPPGSRSQKVPVNKLVRTDSLDPAGRLHAYMQVIPGGHQEKSVTLNAVRSSV
RQRRSLQDSIELTSVEELLVEINNNYDPGMMDIVKHCTYVGMADDVFALLQHKTHLYLAN
VVNLSKELMYQQVLSRFGHFNAIQLSDPAPVKDLIILALKEEDLDSECNDDDTFKEKIAD
MNTDLLKTKAGMLEEYFGIHIDDQGNISRLPVILDQYTPDMDRIPEFVLSLGNDVDWDDE
RNCIQTVSAALGNFYAMHPPMLPNPSGEGLLFYKKRKLFDSCAMENTCDNTGSDVIDSNI
EQELLSEAETAWAQREWSIQHVLFPSMRLFFKPPPSMATNGTFVKVASLEKLYKIFERC
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgccacccaaaattcaacgcctagcggaatcggtcgttaaccgaatcgccgcc
ggcgaggtaatccaacgtccagtctccgccgtaaaggaactcgtcgaaaacagcctcgac
gccgcatccacttccataaaccttacaatcaaagacggcggtctgaaactgattcaagtc
tccgatgacggtcacggtattcgacgcgaagatcttccgattttgtgtgagcggcatacg
acttcgaagttgtctgcgtttgaggatttgcagaggattacgtctatggggtttagaggt
gaagcgcttgctagtatgacttatgttgcgcatgttacggttactactattactaaaggc
caattgcatggttacagggtatcctatagagatggtgtcatggagcaggaacctaggccc
tgtgctgctgtaaaaggaacacagataatggttgagaatctattctataatatggctgca
aggaagaagacactacaaaattcttcagatgattactcaaagatagtggatgttgtcagt
cggtttgcaatacatcataccaatgtcagtttctcttgcagaaagcatggagctgttaaa
gcagatgttcacaccgtggccacgtcttcaaggcttgatgccatcagaacagtttatggg
gtctcagctgctcacaatctgattgaagtccaagcttcggacaatgatccgtcttcttca
atttttgagatgcatggttatgtgtctaatgctaactatgctgccaagaaaatcactatg
gtgcttttcatcaatgatagactggttgagtggtctgcattgaagagagctattgaaatt
gtttacgcagcaacatttcctaaagcatctaagccttttatatatatttcaattgtttta
cctcctgagaatattgatgtcaacgtgcatccaacaaagagagaggtgagcctcttaaat
caggaagttgtcattgagaagatacaattggtgattgaatcaacattgaggaattccaat
gatgcacgtacatttcaagaacaaacagctggacaattttctacctctcgtactaataag
agcaaggaggttaacctcagccctactccaccgggctcgaggtcacagaaagtgccagta
aataagttggttagaacagattcattagatccagcaggaagattacacgcctacatgcaa
gttatacctggtggacatcaagaaaagagtgtcactttgaatgcagtaaggtcctcagtt
agacaacgaaggagcctacaagattctatagaactcactagcgtagaagagcttcttgtt
gagatcaataacaactatgaccctggaatgatggacattgtaaagcactgcacatatgtt
ggaatggcagatgatgttttcgctttgcttcagcataaaactcatctttatcttgcaaat
gttgtaaacttgagcaaagagcttatgtatcagcaagttcttagccgttttggccatttc
aacgccattcagctaagtgatccagcccccgtgaaagacttgattatattggcactgaag
gaagaggatctagattcagaatgtaatgatgatgacacatttaaagagaagattgcagac
atgaacacagatctgctgaaaacaaaggctggtatgctggaggagtattttggcattcat
attgatgatcagggaaatatctctagacttcctgtgatacttgaccagtatactcctgac
atggatcgcatccctgagtttgtgcttagtttagggaatgatgttgattgggatgatgaa
aggaactgcattcaaacagtttcagctgctctgggaaatttctatgctatgcatccaccg
atgttgcccaatccatctggtgagggattgcttttctacaagaagagaaaactttttgac
agttgtgccatggagaatacctgtgataatactgggagtgatgttattgacagcaatatt
gaacaagaactgctttctgaagccgagacagcatgggcccagcgtgaatggtcaatacaa
catgtgctttttccatccatgagactttttttcaaaccacctccttctatggctactaat
ggtacctttgttaaggtagcttcattggaaaaactgtacaagattttcgaaagatgctag
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