Medicago truncatula (barrel medic): 11419568
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Entry
11419568 CDS
T01716
Name
(RefSeq) tRNA pseudouridine synthase A 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
11419568
Enzymes [BR:
mtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
11419568
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
11419568
Prokaryotic type
11419568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
11419568
NCBI-ProteinID:
XP_003609879
UniProt:
G7JR09
LinkDB
All DBs
Position
4:59242635..59245204
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AA seq
323 aa
AA seq
DB search
MMSLALAAATSSVVTPIPSPTSLLSLNSAASDVVEVKPNQDGYKWRLLLSYDGTRYAGWQ
YQESPPTVQCAVEKALIRATKLQRKDLQLVGASRTDAGVHAWGQVAHFLTPFNYDNLDSV
HAALNGLLPSDIRVREISPASAEFHARFSVKSKIYHYKIYSDTIMDPFQRHFAYHNMYKL
NSAAMREAARYFIGKHDFTAFENASHNDRIPDPVKHIFRFDVKEMGALLQLEVEGSGFLY
RQVRNMVALLLQIGKEATPPDIVPHILASRDRKELAKYCYYLPPHGLCLVSINYNESHLL
PPPGCPAKSFGMHHTIRKCKVVF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtttggcattagcagcagcaacatcatcagtggttactcccattccatctcca
acttcccttctatctttgaattctgcagcaagtgatgttgtggaagtgaagcccaaccaa
gatggctataagtggcgcctccttttgtcttacgatggaacccgatatgcaggctggcaa
tatcaggagtccccccctactgtacaatgcgccgtagaaaaagctttaattagagcaaca
aagcttcaaaggaaggatctccagttggttggtgcaagcaggactgatgcaggagtccat
gcttggggtcaggttgcacattttcttacaccatttaattacgacaatttggatagcgtt
cacgctgctttgaacggtcttcttccttctgatatacgagttagagagatcagccctgca
tcagctgaatttcatgctcggttttctgtaaaaagtaagatttatcattacaagatttac
agtgataccatcatggacccgttccagcgccattttgcttatcataatatgtataaactc
aatagtgctgctatgagagaagctgcaagatattttattgggaagcatgatttcactgct
tttgaaaatgcatctcacaatgatcgcataccggatccagtgaagcatattttccgattt
gatgtgaaagaaatgggagctcttttgcagctagaagttgaaggctcgggcttcttgtat
agacaagtccgaaacatggtcgctttgttgcttcaaattggaaaggaggcaacccctcct
gacattgttccacatattttggcgagtcgcgatcgcaaggagcttgcaaaatactgctat
tatctgccaccgcatggtctttgtcttgtttctattaactataatgaaagtcacttgttg
cctccaccaggttgccctgcaaaaagttttggcatgcatcataccataagaaaatgcaag
gttgtattctaa
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