Medicago truncatula (barrel medic): 11419613
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Entry
11419613 CDS
T01716
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
11419613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11419613
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
11419613
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
LTI65_LTI78_N
ORC5_C
Motif
Other DBs
NCBI-GeneID:
11419613
NCBI-ProteinID:
XP_003590794
UniProt:
G7I3Z1
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Position
1:37271794..37276269
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AA seq
256 aa
AA seq
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MEEKKRHTCLKLQLTEEESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVKQRAAQWDQ
PVEEYVELSERYLGFQQPESVYAFADAGDAHKRLSWTFEKGGMTLHWRWKCMKSPDCKKT
TAEILDFLMDANIRLSEEVVIKTELFEKTKVEAEKCLAQSERIANERVEFESQIYTKFLG
VLNSKKAKLRELRDQLSKQGNGDKSPQEEEDPEKTESFDEESDDGKSDEDPQKCITSSSK
DAGATKRSRPRRTRLA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagaaaagacatacatgcttaaaactacaacttaccgaagaagaatccata
ttcgtcaagggtacatggtttaatactcacttcaacctctccatcaccgacggttccact
tcttggcactgcaacgcatcggaagatgaagtgaagcaacgtgctgctcagtgggaccag
ccggtggaggagtatgttgaattgtctgaacggtatttggggtttcaacaacctgagtct
gtttatgcttttgctgatgctggtgatgctcataagaggttgtcgtggacgtttgagaaa
ggaggaatgacactgcattggagatggaaatgcatgaagtctcctgattgtaagaaaact
actgcagaaatattggactttctcatggatgcaaacataaggcttagtgaagaagttgtc
ataaaaacggagttgtttgagaagacgaaagtagaagctgagaagtgcttggctcagagt
gagagaatagccaatgagagggtggaatttgaatctcaaatctatactaagtttctgggt
gtcttaaattcaaagaaagcaaaactgagagagcttcgagatcagctgtcaaaacaaggt
aacggcgataaatctcctcaagaagaagaagacccagaaaaaactgagagttttgatgaa
gaaagtgatgatggaaaaagtgatgaagatcctcaaaaatgtattactagttcttcgaag
gacgctggagcaactaagcgttctcgtccaaggagaactagactcgcatga
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