Medicago truncatula (barrel medic): 11419878
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Entry
11419878 CDS
T01716
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11419878
03012 Translation factors [BR:
mtr03012
]
11419878
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
11419878
mRNA cycle factors
Stress granule specific factors
11419878
Translation factors [BR:
mtr03012
]
Eukaryotic type
Initiation factors
eIF-4
11419878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
11419878
NCBI-ProteinID:
XP_003626750
UniProt:
G7LCH5
LinkDB
All DBs
Position
8:complement(1679052..1689267)
Genome browser
AA seq
1684 aa
AA seq
DB search
MSYNQSKTEKNDAFYRKSGRSSSFNQQRGPSGGHGRGSGGQAPASSLNSNRSFSKKSNNA
QGGQYRVNPSPVNSTEPNSTYAARTIHNGTHVQPQMHGASDGPVAKASESTAAQRSPRVA
QNAPTSQPPPVSSEPTVPTSPAKGDTSKAFPFQFGSIVPGVMNGVAIPARTSSAPPNLDE
QKRDQARHDSIKPVPSAPIPTVPKPQQPPRNDAVVTEKTNARDTHLGAKAKKDPQLPALT
PASQMQRPSAVPVPGMSMPTPFQQSQQSLQFGGPNPQIQSQGMSSTPMHIPMPMSIPIGN
VGQVQQPVFIPGLQPHPMHSHGMMHPSHNLSFAHQMGHQLPHQLGNMGIGTGPPYPQQQG
GNFAGPRKTTTVKITHPETHEELRLDKRADGYSDGGSSGARPHPNVPSQSHPVKSIAASQ
PSNYYPSGSYSSSPPYYQPPGSLPLTSSQITPNTQPPIFNYPVNNGPQNLAFINSSSLSS
LPVNKVSTPIPHIAEAPTAERSREVPKVTSSASTGVSVTIKPSAVSAVTDSSLTNSSISG
VQNPDTSSEISTQHSKSSEDSSISSLPKQSAASVVTDEKLTVLPTPAVTVDSVSVVTNNE
ANTREPVSRSNSAKDNQKKSGKIGQSSQDQVSVQSPTAASMQSRAVDSSISDTGVSTPVG
SETNHFPAIITEDLLTSEGSVAEVADSLSDHKHDKIDESSEASDLQSADLPEANKETNDS
AENACSDSMSHSVSGTKDRPNLEPNKAKTTSKGKKKRKEFLQKADAAGTTSDLYNAYKGP
EEKKETGLISESSESECTSEGLKQLSADSAQLDAAVSEKSGQNKAEPDDWEDAADVSTPK
LEVDDKSQQDFDGSGSTEKKYSRDFLLKFSEQCITLPEGFEITADIAAALMNSNVGNSRD
SHPSPGRTVDRSRMEHRGNVVAEEDKWNKVSNAFHSGRGLDGSGGFRHGQGGNFGVLRNP
RGPAPIQYGGAILSGPMQSGAHQGGMQRNSPDGERWQRSTSFQQRGLIPSPQSPLQMMHK
AEKKYEIGKVSDAEEAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAITLTGVISQIFE
KALMEPTFCEMYANFCSHLAAELPDLSVDNEKITFKRLLLNKCQEEFERGEREQEEANKV
DEAEGEVKLSNEEREQRRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQDP
DEEDVEALCKLMSTIGEMIDHPKAKEHMDVYFERLKILSNNMNLSSRVRFMLKDVIDLRR
NRWQVRRKVDGPKKIEEVHRDAVQERQAQAQVGRTGRGMGNNQSARRNPMDFGPRGSPML
SPPSPMGGPRGLSTQTRGYGLQDARFEERQSYEPRTLPINFPQRPLGNESITLGPQGGLA
RGMSSRGPTNSNMSIPDVHSGPGDSHRMPSGINGYGNLSERTSYGNREDLASRYMSDRPS
SPAGYDHSSAASHNINYGNRDLRNDDRNLNRPVATSPHAQPQGPIVSQNASTDEQLRDMS
LSAIREYYSARDVNEVAQCIKDLNSPNFHPSMVSLWVTDSFERKDAERDLLAKLLVKLGK
SQDGLLSPTQLIEGFETVLSTLEDAVNDAPKAPEFLGRIFAELITESLVGLNEIGQLVHD
GGEEPGSLLEFGLAADVLGSTLEAIKHEKGDVVLSEIRTSSTLRLESFRPPNNSTTSRKL
EQFI
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaatcaatcaaaaacggaaaagaacgacgccttttatcgaaaatctgggcga
tcgtctagctttaatcagcagagaggtccctcaggtggtcatggaaggggcagcggtggc
caggcaccggcttcgtcacttaactctaataggagttttagcaagaagtctaataatgca
caaggtgggcaatatcgggtgaacccttcacccgtgaattcaactgagccaaacagtact
tatgctgctcgaaccatacataacggtactcatgtacaaccccagatgcatggagcatct
gatgggccggttgcaaaggcatctgaatcaacagctgcacagaggagccctagagttgct
caaaatgcaccaacctctcaaccgccccctgtgagctccgaaccaaccgttcctacaagc
cctgcaaagggagatacttcaaaggcattcccttttcagtttggatcgattgttcctggt
gttatgaatggggtggctattcctgctcgtacaagctcagctcctcctaatttagatgag
cagaagcgtgatcaggctcgtcacgactctattaaacctgttccttcagcgccaatccct
actgttccgaagccacagcagccacctaggaatgatgcagttgtaaccgagaaaactaat
gccagagatactcatctgggggctaaggctaaaaaggatccccagttgccagctttgact
ccggcaagccagatgcagaggccttctgctgttcctgtacctgggatgtcaatgccaaca
ccatttcagcagtcacagcaatctttacagtttggtggtcctaatccacaaattcaatct
cagggaatgtcttcgacacccatgcatattcctatgccaatgtctataccaatcggaaat
gttggacaagtgcaacagccggtttttattcctggtcttcagcctcatccaatgcactct
catgggatgatgcatccaagccataacttaagtttcgctcatcaaatgggtcatcagttg
ccccatcaattgggcaacatgggcattggcaccggccctccatacccccagcagcagggt
ggaaattttgcgggtcctcgaaaaactactactgtcaagataactcaccctgaaacgcat
gaagagctaaggcttgataaaagggcagatggatattcagatggtgggtcatctggtgct
aggccgcatcctaatgtaccttctcaatcccatcctgttaaatccattgctgcttctcag
ccttcgaattattatccttccggctcatatagttccagtcctccctattatcaacctcct
ggttctcttccgttaacaagtagccagataactcccaacacccagccaccgatatttaat
tatcctgtgaacaatggtccacaaaatttagctttcatcaattcatcttctcttagttct
ctgcctgttaataaagtcagcactcctattcctcacattgctgaagctcccactgcagaa
cgttctcgtgaagtgcctaaagtgacatcatcagcttcaacgggggtttctgtgactatt
aaaccaagtgctgtttctgctgttaccgactcatcattgactaattctagtatttctggt
gttcaaaatcccgatacctcctcggaaatctctacacagcattctaaatcttccgaggat
tcttcaatttcgagtttgccaaaacaatctgctgcatctgttgtcactgatgagaagctt
acagtgctacctacgccagctgtgactgtggactctgtttcagttgtgactaataatgaa
gccaacacgagggaacctgttagtaggtccaactctgcgaaggataaccagaagaaatct
gggaaaataggtcaatcgtctcaagatcaggtttctgtgcaatctcctacagcggctagt
atgcagtctcgagctgttgacagtagtatatctgatactggggtttccacacctgtagga
agtgaaacaaaccattttcctgcaattatcactgaagatcttctcacatctgaaggatct
gttgctgaagtggctgatagtttgagtgatcataagcatgataagatagacgaatcatcc
gaagcatcagatctgcagtctgctgatttaccagaagcaaacaaggaaaccaatgatagt
gcggagaatgcatgcagtgactcgatgtcccattcagtgtcgggtaccaaggatagacca
aatttagaaccaaataaggcgaaaactacatctaaagggaagaagaaaagaaaagagttt
ctccagaaagcagatgctgctgggacaacttctgatctttataatgcatataaaggacct
gaggaaaagaaagaaactggcttaatttcagagagctcagaaagtgaatgtacatctgaa
ggtttaaagcagttatccgcagattctgctcagttagatgctgcagtaagcgagaaaagt
ggtcagaataaagccgaacctgatgactgggaggatgcagctgacgtgtctacaccaaag
cttgaagttgatgataaatctcagcaggattttgatggaagtggaagtacagaaaaaaag
tactcgcgtgattttcttttgaaattctcagagcaatgcattactcttcctgaaggtttt
gaaattacggcagacatagctgcggctttgatgaattccaatgttggtaattctcgtgat
tcacatcctagtcctggaagaactgtagacaggtcaaggatggaacaccgtgggaatgtt
gtggccgaggaagacaaatggaacaaagtttccaatgcttttcattctgggcgtggtttg
gatggtagcggtggatttcgacatggccaaggaggcaattttggtgttttaaggaatcct
cgtggaccggcacccatccaatatggtggggcgatcctttctgggccaatgcaatctggg
gcacatcagggtggaatgcaaagaaatagtcctgacggggagaggtggcaacgttctact
agcttccagcagaggggtttaattccttctcctcagtctcccttacagatgatgcacaag
gctgagaagaagtacgaaatagggaaagtgtcagatgcagaagaggcaaagcagaggcaa
ctgaaagctatcctgaacaaactaactcctcaaaatttcgatagactttttgaacaggta
aaagcagttaatattgacaacgcaatcactctcactggtgtcatctcacaaatcttcgag
aaggctctgatggaacctaccttctgtgaaatgtatgccaacttctgctcacatctggct
gctgagttgcctgatttgagtgtggacaacgaaaagataacttttaagaggttattatta
aacaaatgccaggaggaatttgagaggggtgaaagagaacaagaagaggcaaataaggtg
gatgaggctgagggtgaggtcaagctgtcaaatgaagaaagggagcagagaagaaccaag
gcaagaaggcgcatgttaggaaacatcagattgattggagaactttataagaagaaaatg
ttgacagagaggataatgcacgagtgcataaagaagttactaggtcagtgtcaggatcct
gatgaggaagatgttgaggctctgtgcaagctgatgagtactattggggagatgattgac
catcccaaagctaaagaacatatggatgtatattttgaaaggttgaaaatattatcaaac
aacatgaatttatcttctagggtaagatttatgttgaaggatgtaattgatttgagaagg
aatagatggcaagtaaggagaaaagttgatggtccaaagaagattgaggaggtacacaga
gatgccgtgcaagaaaggcaggctcaagcacaagttggtaggacgggtcgtggtatggga
aacaatcaatctgcaagaaggaaccccatggattttggtcctagaggatcacctatgttg
tctcctccttctccaatgggtggaccgcgtgggctttctactcaaacacgtggatatggt
ttacaagatgctcgttttgaagaaaggcaatcttatgagcctaggaccttgccaattaat
tttcctcaaagacccttgggtaatgaatctataacattgggaccccaaggtggtcttgct
aggggaatgtccagtagaggaccgacaaattcaaatatgtcaatacctgatgtgcattct
ggccctggagactctcacagaatgcctagcggtattaatggttatggcaatttatctgaa
cgcacatcgtatggcaatagggaggatcttgcatcaagatatatgtcagacagaccttca
agtccagctggatatgatcattcaagtgctgcatctcataatataaactatggtaacaga
gacttaaggaatgatgatcggaatctaaataggcctgttgcaacttcacctcatgctcag
ccgcaagggccaattgtctctcaaaatgcttctacagatgaacaactacgggacatgtcc
ttgtcagcaatcagagaatactacagtgctagagatgtaaacgaagttgctcaatgcatc
aaagatctgaactctccaaactttcatccttctatggtttctctctgggtcacagactca
tttgagagaaaggacgctgaaagagatcttttggctaaactgcttgtcaagcttgggaag
tctcaggatggcctcctgagtccaactcagcttatcgaagggttcgagacagttctcagt
acattggaggatgctgttaatgatgcccccaaggcaccggagtttcttggccgtattttt
gcagaacttataacagagagtttagtcggtttgaacgagattgggcagttagtacatgat
ggtggagaggagccaggcagtctcctagaatttggacttgcagctgatgttcttggaagc
acattggaggcaataaagcacgagaaaggggatgttgttctaagtgagattcgtacaagc
tcaaccttgcggttggagtctttccgaccacctaataattctactacatcaaggaagttg
gagcaatttatttag
DBGET
integrated database retrieval system
