Medicago truncatula (barrel medic): 11419994
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Entry
11419994 CDS
T01716
Name
(RefSeq) long chain acyl-CoA synthetase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00061
Fatty acid biosynthesis
mtr00071
Fatty acid degradation
mtr01100
Metabolic pathways
mtr01212
Fatty acid metabolism
mtr04146
Peroxisome
Module
mtr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
11419994
00071 Fatty acid degradation
11419994
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
11419994
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mtr01004
]
11419994
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
11419994
Enzymes [BR:
mtr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
11419994
Lipid biosynthesis proteins [BR:
mtr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
11419994
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of breast milk
11419994
Exosomal proteins of breast cancer cells
11419994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
11419994
NCBI-ProteinID:
XP_039685731
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Position
1:42552839..42559416
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AA seq
684 aa
AA seq
DB search
MTKNYTVGFSEYNVKRFLLQRRMKSFSVKVEEGKEGKNGMLSVGPVYRNLLSQNEFPPMD
PDFTSAWDIFSTSVKKHPQNRMLGWRKIVDGKIGPYVWKTYKEAYDEVLQIASALKACGA
KSGSKIGIYGSNCPQWIIAMEACSAQNFICVPLYDTLGSGAINFIIDHAEIDYVFVQDKK
VKELLNADCKSSKRLKAIVGFTSLTEEEKDEATNAGIKPYTWNQFVQKGKENPSSINPPL
AHDICTIMYTSGTSGDPKGVVLTHENVLALVRGMDLFMEQFEDKMTVDDVYLSFLPLAHI
LDRCIEEYFFRNGASVGYYHGDLNALLEDLSELKPTLFAGVPRVFEKVYEGIKKAVAQLN
PVRRTVFGMLYNYKLGWMNKGYKQREASRLADLLAFRKVKARLGGRVRLIISGGAALSSE
IEEFLRVTTCAFVCQGYGLTETCGPTTLTFPDEMCMLGNVGVVTVFNELRLEEVPDMGYN
PLGTPPCGEICVRGKSVFTGYHKNPELTKEAIIDGWFHTGDIGEMLPNGIIRIIDRKKNL
VKLSQGEYIALEYLENVYTITPIVEDIWVYGNSFKSMLVAVVVPNEDVTNKWAYANGHIS
SFSKLCSLDQLKKYVLSELKSTAVRNKLKGFEHIKGVILDPLPFDMERDLVTATLKKKRN
NMLKYYKVDIDELYKSLTGDKPKF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaattacactgtaggattctccgaatacaatgttaagaggtttttgttacaa
agaagaatgaagagcttttcagttaaggttgaggaaggaaaggaaggaaaaaatggcatg
ctttctgttggtcctgtttaccgtaaccttctctcccaaaatgaattccctccaatggat
cctgatttcacctctgcttgggatattttcagtacatctgtcaaaaaacatcctcaaaac
cgcatgcttggatggcgtaaaattgttgatggaaagatcggaccatatgtttggaagaca
tacaaggaagcttatgatgaagtcttacaaattgcttctgctttgaaagcatgtggtgct
aaatctggttcaaaaattggaatttatggatctaactgcccacaatggattatcgcaatg
gaggcttgttctgcacaaaacttcatttgtgtacctctctatgacacacttgggtctggt
gctataaattttatcatagatcatgcagaaatagattatgtttttgttcaagataagaag
gttaaagagcttttgaatgctgactgtaaatcctctaagagattgaaagccatagtgggc
ttcacttcattaactgaggaagagaaagatgaggccacaaacgctggaattaaaccatat
acatggaatcaattcgtacaaaagggaaaagaaaacccgtcaagtattaatcctcctttg
gctcatgacatatgcacaataatgtatacaagtggaactagtggagatcctaaaggcgtt
gttttaacacatgaaaacgtactagctttagtaagaggaatggatcttttcatggaacaa
tttgaggacaagatgactgtggatgatgtgtatttatccttcctccctttagctcacatc
cttgatcgttgtattgaagaatatttttttcgtaacggtgcttctgttggttactatcac
ggggatctgaatgcgttgctggaggatttaagtgagttgaagccaacactgtttgctggt
gtaccacgggtttttgaaaaagtttatgaaggtatcaagaaagcagtggcacaactaaat
ccagtgaggagaacagtttttggcatgctctacaactataaacttggctggatgaacaaa
ggatacaaacagagagaagcatcacgtcttgcagaccttctagccttcagaaaggtcaaa
gcaaggctaggtggacgtgttagactaataatatctggaggtgcagccttaagctccgag
attgaagaattcttgcgtgtcactacttgtgcctttgtatgccaaggctatggtttgaca
gaaacatgtggaccaactactcttacatttccagatgaaatgtgcatgctaggtaatgtt
ggtgttgtaactgtattcaatgaattgcggctggaggaagttccagacatgggttacaat
cctcttggaactccgccatgtggagagatatgtgtcagaggcaaaagtgttttcactggt
taccataagaatcctgagttaacaaaagaagccataatagatggatggtttcacacaggg
gacataggagaaatgcttcctaatggtattataaggattattgacaggaagaagaatctt
gttaagctttctcaaggagagtatatagcacttgagtatcttgaaaatgtttatacaatc
actcctatagttgaagatatttgggtatatgggaatagcttcaagtcaatgctggttgca
gtagtagttccaaatgaagatgttactaacaagtgggcatatgcaaatggtcacatatct
tccttctccaaactatgttcccttgaccaattgaagaaatatgtgctatctgagctcaaa
tctacagctgtgagaaacaagttgaagggatttgaacatatcaaaggggtaatattagac
ccgcttccatttgatatggaaagagacttggtaactgcaacattgaaaaagaaaaggaac
aacatgctcaagtattataaggtggatatagacgagctatacaaaagtttgaccggagat
aaacctaaattttga
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