Medicago truncatula (barrel medic): 11420033
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Entry
11420033 CDS
T01716
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
11420033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11420033
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
11420033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Utp13
Motif
Other DBs
NCBI-GeneID:
11420033
NCBI-ProteinID:
XP_003591585
UniProt:
G7I2U5
LinkDB
All DBs
Position
1:complement(43840186..43842184)
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AA seq
530 aa
AA seq
DB search
MEEARVSKNFPVKPKLKTKPRTQSQTSESKYWSSFKTQQIPKQFSIPSITFSPNPPYSFA
AANSASLSIFSSQTLSQTATISSFSDTVSSVSFRNDARLVAASDLSGFIQIFDVKTRTRL
RRLSSNNRPVRFVHYPRHDKLHLVSGSDDAVVRYWDVAEETPFMVFRGHKDYVRCGDSSP
VSSDSFVTGSYDHFVKVWDVRVRGETNSVMDFNHGCPVEDVVYLPGGGMIATAGGNAVKI
WDLIGGGRLVYSMESHNKTVTKICVGRIGKDSGDESDQYRIMSVGLDGYFKVFDYGNMKV
TYSMRYPAPLLSVGYSPDCSTRVIGTSNGIIYAAKRKVKVDEKEVGVSEASSFWRIRPVE
DTEKKVLKTTNFRYFQRGQGEKPSEGDYLVMKPKKVKLTAHDKLLNKFRHGEALVCVLEG
KNPGHVVAVMEELVSRKKLLRCVSDLDLEKLELLLAFLHKYCTVPKYSSLLMGLANKVIE
MRADDIKNSEVLKKHIRNLKSTVEAEIRIQQSLQEIQGIISPLLRIAGRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaagagtatcaaaaaacttcccagttaaaccaaaactcaaaaccaaacca
agaacacaatcccaaacctctgaatccaaatactggtcttccttcaaaacccaacaaatc
cctaaacaattctctatcccttccatcaccttctccccaaatccaccctattccttcgcc
gccgctaattcagcctctctctccatcttcagctctcaaactctttcccaaaccgccacc
atctcctccttctccgacactgtttcctccgtctctttccgtaacgatgctcgtctcgtc
gccgcttcagacctctcaggttttatccaaatctttgatgtcaaaacacgtacccgtctc
cgtcgtcttagttcaaacaatcgtcctgttaggtttgttcattatccgcgtcatgataag
ttgcatttagtttctggcagtgatgatgctgttgttaggtattgggatgttgctgaggaa
actccgttcatggtgtttcgtggccataaggattatgttaggtgtggtgattcgtcgccg
gttagttctgatagttttgttactggctcttatgatcattttgtgaaagtttgggatgtt
agggttagaggtgagacgaattcggtgatggattttaatcatggttgtcctgtggaggat
gttgtttatttgccgggtggtgggatgattgcaactgctggtgggaatgcggtcaagatt
tgggatttgattggtggtgggaggcttgtgtattccatggagagtcataataagacagtg
acgaagatttgtgttgggaggattgggaaggattcgggggatgagtcagatcagtatagg
attatgagtgttggtttggatggttattttaaggtgtttgattatgggaatatgaaggtt
acttattcgatgaggtatcctgcgccgcttttgtctgttggatattccccggattgttct
acgagggtgattggaacttcgaatgggataatttatgctgcgaagaggaaggtgaaggtg
gatgagaaggaagttggcgtgagtgaggctagttcgttttggagaattaggccggtggag
gatactgagaagaaggttttgaaaactactaactttaggtattttcaaagagggcaagga
gagaaaccgtctgagggtgattacttggttatgaagccaaagaaggtgaagttgactgca
catgataagcttttgaataagtttaggcatggtgaggctcttgtgtgcgtgttggaaggt
aaaaatccggggcatgtggttgctgtgatggaggaattggtgtctagaaagaagttgttg
aggtgtgtttctgatttggatttggagaaactggaactgcttttggctttcttgcataag
tattgtactgtgcccaagtattctagtttgttaatgggattggctaataaggttattgaa
atgagggctgatgatattaagaattctgaagttctcaagaagcatataagaaatctcaag
agcactgtcgaggcagagattcggattcaacagtcgttgcaagagatacaagggataatt
tctcctttgttgagaattgctggaagaagatga
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