Medicago truncatula (barrel medic): 11420285
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Entry
11420285 CDS
T01716
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
11420285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11420285
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
11420285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
11420285
NCBI-ProteinID:
XP_003619723
UniProt:
G7KNV7
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All DBs
Position
6:complement(31968451..31972581)
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AA seq
323 aa
AA seq
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MEKISPHSLSMKNESSSVAPIGASAQSRTIAQTMTYMERLVIELSNPDLRENALRVLSKR
NELSQELAHLLWNSFGTIAILLQEITSIYCTLLPPTLTLAQSTRVCNVLALLQYLASHSE
TRMLFLNASMPLYLYPFLKTKEKSPQFEYLRFASLGVIGALVKVNTKEVLGYLILSEIIP
LCLSNMEIGNEISKTTATFIFQKILFDDDGLAYVCATAERFFAVRRVLDMMSESLDKQPT
CRLLKYIIPCYARLSNDRWAGIALANSLPSVFRDTIFLNRVREDPTTWEWVKHLQENVRK
NQEPLVAGGGENNDIVESSTSGQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatttctcctcattcgctctcaatgaagaatgaatcttcgtctgtagctcct
attggtgcttctgctcaatcaagaacgattgcccaaacgatgacctacatggaacgcctt
gttattgaacttagcaatcctgatctcagagaaaacgctcttcgtgtcctctccaagagg
aatgaattatctcaagaacttgcacatttattatggaattcttttggcactattgcaata
cttttacaggaaataacttcaatatattgtactcttttaccaccgactcttactctagca
caatcaactcgagtgtgtaacgttcttgcactacttcagtatttggcatctcactctgaa
acaaggatgttgttcctaaatgctagcatgcctttgtatttgtatcccttccttaaaaca
aaagaaaagtcaccacagtttgagtatttaaggtttgcaagtcttggagtcattggtgct
ttagtgaaggttaacaccaaagaagtcttgggttaccttattttaagtgagataattcca
ctctgcttgagcaacatggagatcggcaatgaaatatcaaaaactactgcaacctttata
ttccagaaaattttgttcgatgatgatggtttggcctacgtttgtgctacagcagagcgg
ttttttgcagtacgtcgagttttggacatgatgtccgaaagtcttgacaagcaacctaca
tgtcgtcttttgaagtatattattccttgctatgctcgtttgtctaatgatcgctgggct
ggcattgcattagcaaactctcttcctagtgtgtttagagacaccatttttcttaatcgc
gttcgtgaggacccaacaacttgggagtgggtaaaacacttgcaggagaatgttagaaag
aaccaggaacctttagtagcaggtggaggagaaaacaatgatattgtggagtcgtcaaca
tcgggacaatga
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