Medicago truncatula (barrel medic): 11420367
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Entry
11420367 CDS
T01716
Name
(RefSeq) far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11420367
03041 Spliceosome [BR:
mtr03041
]
11420367
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
11420367
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
11420367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
11420367
NCBI-ProteinID:
XP_003589039
UniProt:
G7IBA6
LinkDB
All DBs
Position
1:4519380..4526271
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AA seq
627 aa
AA seq
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MADESQYDSTPPSLKRKYDEQPPPHSRTTGFSDGPPPPSYNNVPPPATADFELIKQRAQQ
VAARLLSGAAAPSDVVKRTKFDNGPPSPYDSSDLKSQYAAPMSIPSYSHQGSSKKIEIPN
GRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATAEKLIKE
VLAEAESGGNGLVTRRMTGQGGADEFSMKIPNNKVGLIIGKGGETIKSMQATTGARIQVI
PLHLPPGDTSTERTLKIEGTSEQIESAKQLVDSILSGENRLRNPSMSGGYSQQGYQARPP
SSWAPPAASQQPGYGYAQPGAYPGPTPQYNVPQQAYAGYPPHSAGGYSTNWDQSTATTQQ
STYDYYNQQPQQPQNPGGPAPPADGTAYNYSQPPSAGYNQPGQGYSQDGYGAYQQPPQSG
YAQPTSYDQQQGYGSAQEGQTTTNYGSQGQGDATQVPPVQPSQQGYGSSQQPSPNAAKYP
PQGAAQPSYGVPPTSQTAYGSQPQTQSGYGPPQTQKPSGTPPAYGQSQSPNAAGGYGQPG
YPPSQPPPSGYSQPGYPPSQPPPSGYSQPGYGQAPQSYNSGSYGAGYPQAPAYSADGNAS
GNARGGSYDGAPAQGAQQASVAKSPQS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaatcgcaatacgactcaactccaccttccttgaaacgcaagtacgacgaa
caaccaccgcctcactcacgaaccaccggtttctccgacggacctcctcctccttcttac
aacaacgtcccccctcccgccaccgctgatttcgaactcatcaaacaacgcgctcaacaa
gtagcagctcgtctcctctccggcgccgcagctccctctgatgtcgtcaaacgtaccaaa
ttcgacaacggtcctccttccccttacgattcctcagatttgaagagtcaatatgcagct
cctatgagtataccttcgtattcacatcaagggtcaagcaagaagattgaaatccctaat
ggaagggttggtgttattattggaaaaggtggagaaactatcaagtatcttcagttgcaa
tctggtgcaaaaatccaagttacccgtgatatggatgctgatcctaattctccaaataga
ttggttgagcttactggtacttctgatgctattgctactgctgagaaactcatcaaagaa
gttcttgctgaggctgaatccggaggtaatggacttgttactcgacgaatgactgggcag
ggtggcgctgatgagttttccatgaagattccaaataacaaggtcggtcttataatcggt
aaagggggagaaacgataaagagtatgcaagctacaactggagcaagaattcaggtgatt
cctcttcatcttcccccaggcgacacatccactgaaagaacactaaaaattgaagggacc
tctgaacaaattgaatctgcaaaacaattggttgattcaatcctcagtggcgagaatcgt
cttagaaatccatcaatgtccggtggttactctcagcaaggttaccaagctcggccaccc
tctagctgggctccccctgccgcttctcaacaacctggttatggctatgcacaacctgga
gcataccctggtccaacacctcagtacaatgtgcctcagcaagcttatgcaggttatcct
ccccattcagctggtggatattctaccaattgggaccagtccactgcaactacccaacag
tctacctatgattattataatcaacagcctcaacaaccgcagaatcctggtggtcctgca
cctccagctgatgggactgcttacaattacagccaaccaccttccgctggttataaccaa
ccgggacagggatattctcaggatggctatggtgcatatcaacaacctccacaatcagga
tatgctcagccaacatcatatgatcagcagcaaggctatgggtcagctcaagagggccaa
actaccaccaactatggatcacaaggacaaggggatgcaacccaagttccacctgtccaa
ccttcccaacaaggttatggcagcagccaacagcctagcccaaacgctgctaagtatcca
ccacaaggggctgctcagccaagttatggggtaccaccaacctcccaaactgcatatggc
agtcaacctcaaacacagtctggttatggaccccctcaaactcaaaagccaagtggtact
ccacctgcatacggtcaatcacagtcacctaatgctgctggaggctatggtcagccgggg
tatcctccttcccagccccctccttctggatattcccaaccggggtatcctccttcccag
ccccctccttctggatattcccaacctggttatggtcaggcaccacaatcatacaacagt
ggttcctatggtgctggttatcctcaggccccagcatattctgctgatggtaatgcaagt
gggaatgcccgtggtggcagctatgatggagcacctgcacagggagctcagcaggctagt
gttgctaagtcacctcagagctga
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