KEGG   Medicago truncatula (barrel medic): 11420719
Entry
11420719          CDS       T01716                                 
Name
(RefSeq) clathrin heavy chain 2
  KO
K04646  clathrin heavy chain
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04142  Lysosome biogenesis
mtr04144  Endocytosis
mtr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    11420719
   04142 Lysosome biogenesis
    11420719
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    11420719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    11420719
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtr04147]
    11420719
Membrane trafficking [BR:mtr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    11420719
Exosome [BR:mtr04147]
 Exosomal proteins
  Proteins found in most exosomes
   11420719
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 11420719
NCBI-ProteinID: XP_003616661
UniProt: G7K259
LinkDB
Position
5:36929015..36942437
AA seq 1706 aa
MAAANAPIAMKEVLTLPSVGINAQFITFTHVTMESDKYICVRETSPQNSVVIVDMSMPNQ
PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIELKTKMKSHQMPEQVVFWKWI
SPKMLGLVTQTSVYHWSIEGDSEPVKVFERTANLANNQIINYRCDPTEKWLVLIGIAPGS
PERAQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSVLISFASKTFNAGQVIS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEATSAGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLEL
AVSLAKRGNLPGAEKLVVERFHELFSQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILVYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGSPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLANLRGNLQIIVQVAKEYSEQLSVEGCIKIFEQFR
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPENFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTSKNSLFKLQARY
VVERMDGDLWDKVLNPDNEYRRQLIDQVVSTALPESSSPEQVSATVRAFMTADLPHELIE
LLEKIVLQNSAFSGNHNLQNLLILTAIKADSSRVMDYINRLDNFDGPSVGEMAVEAQLYE
EAFAIYKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQTAKAQLREGLVSDAIE
SFIRADDTTQFLDVIRAAEDANVYHDLVKYLLMVRQKAKEPKVDGELIYAYAKIDRLSDI
EEFILMPNVANLQTVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLQQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGYFNELISLMESG
LGLERAHMGIFTELGVLYARYRPDKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTFLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLEEHPDLINDILNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSSNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGE
RELAEELLVYFIDQGKKECFASCLFVCYDLIRADVVLELAWMHNMIDFAFPYVLQFIREY
TGKVDELVKDRIEAQNEVKSKEKEEKDVVAQQNMYAQLLPLALPAPPMPGMGGPGYGGSY
GPPPPVSGMGMPQMPPFGMPPMGSSY
NT seq 5121 nt   +upstreamnt  +downstreamnt
atggcggccgcgaacgctccgatcgccatgaaagaagtcctaaccttaccgagtgttgga
atcaatgcacaattcatcacattcacgcatgtgacgatggaatcagacaagtatatatgt
gttcgagaaacgtctccacagaatagtgttgttattgttgatatgagcatgccaaatcaa
cctttgaggaggccaattactgcggattccgctcttatgaatcctaattctagaatcctt
gctttgaaagcccaactccaagggactacacaggatcacctacaaatatttaacattgaa
ttgaaaacaaagatgaaatcgcatcagatgcctgagcaggtagtcttttggaagtggatt
agccccaaaatgttgggcctcgtgacacaaacctcagtataccactggtccattgaaggt
gattctgaacctgttaaggtatttgagagaacagcaaatttggcgaacaaccagataatc
aattatcgatgcgaccctacagaaaaatggttggtcttgattggtatcgctcctggttcc
cccgagagggcacaattggttaaagggaacatgcagcttttctccgtggatcagcagcgt
agtcaggctcttgaagctcatgctgcatcatttgcccaattcaaagttcctgggaatgaa
aatccgtctgttttgatttcttttgcctcaaagacatttaatgctggtcaagttatatcg
aagttacatgtcattgaactgggcgcacagccagggaagccatcatttacaaagaaacaa
gcagatctcttcttccctccagattttgctgatgactttccagttgcaatgcagatatcc
cacaaatatagtttgatttatgtgatcaccaaacttgggctactttttgtatatgatttg
gagacagctaccgctgtatataggaacaggattagtccagatcctatatttttgacatca
gaagccacatcagcaggaggcttttatgccattaataggagaggccaagttttgttggcc
actgtcaatgaacaaacaattgtgaattttgtcagcggtcaattaaacaatttggagcta
gctgttagtcttgcgaaaagagggaatcttcctggtgctgagaagctggttgtggagcgt
tttcatgaattgttttcccaaacaaagtataaagaagcagcagagcttgctgctgaatct
ccacaaggaatccttcggacccctgacacagttgccaaatttcagagtgttcccgtgcaa
gctggtcaaacgccgccgctgctgcagtattttggaacacttttaacgagaggaaagctg
aatgccttcgaatcattagaattgtctcggttggtagtgaaccagaacaagaaaaacctg
ttggaaaattggttggcagaggacaagcttgaatgcagtgaggagctaggagatctcgtt
aagactgtggacaatgatcttgctttaaaaatatacatcaaagccagagctactccgaaa
gttgttgctgcttttgctgagaggagggagtttgataagattctggtctactctaagcag
gttggatacacacctgactaccttttcctcttgcaaacaattctccgaacagatcctcag
ggtgctgttaattttgcattaatgatgtctcaaatggagggaggtagcccaattgattac
aacaccataactgatctgtttcttcagagaaacctgatccgtgaggcaacagcttttctc
ctggatgttttaaagccaaatttacctgaacatggattccttcaaacaaaggtgttggag
ataaatctggtcactttccctaatgttgctgatgctattttggctaatggcatgttcagc
cattatgaccgtcctcgtgttgcccagctttgtgaaaaagctggcctttacgtgcgagct
ttgcaacattacacagagttaccagatataaaacgtgttattgttaatacacatgctatt
gagcctcagtcacttgtagaattttttggtactctctcacgagaatgggcattagagtgc
atgaaagacttgttactggccaatcttaggggcaatttacagattattgtgcaggttgcc
aaagaatattctgaacaattgagcgttgaaggttgcattaaaatttttgagcagtttagg
tcatatgaagggctgtacttttttcttggctcatatttgagctccagcgaggaccccgac
attcatttcaagtatattgaggcagcagcgaagactggtcaaatcaaggaggttgagcgt
gtgacaagagaatccaatttctatgatgccgaaaaaacaaagaacttcctaatggaggct
aagcttccagatgcacgacctttaatcaatgtttgtgatcgatttgggtttgttccagat
ctgacacactacctatacacaaacaacatgcttcgctacattgaaggttatgttcagaag
gtgaacccagggaatgctcctttagttgttgggcagctgctagatgacgagtgccctgaa
gattttatcaaaggtttgattctttctgttcgttccttgctgccagtggagccccttgtg
gaggagtgtgagaagaggaatcgccttcgtttgctcacacagtttttggaacatctcgtg
agtgagggaagccaggatgtacatgttcacaacgccctgggtaaaattatcattgatagc
aacaacaacccagaaaattttctcacaaccaacccttactatgattctcgagttgtgggc
aagtattgtgagaaacgcgacccaaccttggcagttgtagcttaccggcgaggacaatgt
gatgaagaacttatcaatgtcaccagtaaaaattctttgttcaaactgcaagcaaggtat
gtcgttgagagaatggacggcgatctttgggataaagttcttaatcctgataatgaatat
agaaggcaacttattgatcaggttgtatctactgctttgcctgaaagctcaagccctgaa
caagtttctgcaactgttagggctttcatgacagctgatctgcctcatgaattgattgaa
cttctcgagaagattgtccttcagaattctgcattcagtgggaaccacaatttgcagaat
cttctcattttgacagcgataaaggctgattcatccagagttatggattatatcaataga
ctggataattttgacgggccttcagttggggaaatggctgtagaagcacagttgtatgag
gaagcatttgcaatttacaagaagttcaacttgaatgttcaagcagtcaatgtgttgctt
gataatattcgcagcattgatagagctgttgagtttgctttcagagttgaagaagacgct
gtttggagtcagacggcaaaggctcaactcagggaagggcttgtaagtgatgcaatagag
tcatttatacgagcagatgatactacacaatttttggatgttatccgtgctgctgaagat
gccaatgtttaccatgacttggttaaatacttgttaatggtaagacagaaggcaaaagaa
ccaaaggttgacggcgagctcatttatgcatatgcaaaaattgacaggcttagtgacatt
gaagagttcattctgatgccaaatgttgctaatttgcaaactgttggggaccggttgtat
gatgaagcattatacgaggctgcaaaaatcatatttgcctttatatctaactgggccaag
ttggctattacactggtcaaattacaacaattccaaggggcagttgatgcagctaggaaa
gctaacagctcaaaaacatggaaggaagtttgttttgcgtgtgttgatgcagaggagttt
cgtttggcccagatatgtggactcaacattattattcaggtggatgacttggaagaggtc
agtgaatattaccaaaatagaggttacttcaatgagttaatatctctcatggagagtggt
ttagggttagaacgagcacatatgggcatcttcaccgagctaggagttctttatgctaga
taccgccctgataagcttatggagcatatcaaactattctcaacccgcctcaatatccca
aaacttattagagcatgtgatgaacaacaacattggaaagaattgacctttttgtatatc
caatatgatgagtttgataatgccgcaactaccatcatgaaccattcacctgaagcgtgg
gatcacatgcagttcaaggatgttgccgtcaaagttgctaatgttgagttgtattacaag
gctgttcacttctatctggaagaacatccagacctcatcaatgatattctgaatgtcctt
gcacttcgtgtggaccacacacgtgttgttgacatcatgcgtaaggctggtcacctccgt
cttgtgaagccatacatggttgcagttcagagcagcaacgtttctgctgttaatgaagcc
ctgaatgagatatatgttgaggaggaagattatgatagattgcgggagtcaattgatttg
catgataatttcgatcaaataggccttgcacaaaagattgaaaagcatgagcttcttgag
atgaggcgtgttgctgcttatatttacaagaaggcaggaaggtggaagcagtccattgct
ttatcaaagaaggacaacctttacaaagatgccatggagacagcttcacaatctggcgag
cgtgaacttgccgaggagttgcttgtttatttcattgatcagggaaagaaggaatgcttt
gcctcatgtctatttgtttgctatgatttaatacgagcagacgttgttcttgaactagct
tggatgcacaatatgattgactttgccttcccatacgtcttgcagtttatccgtgaatac
actggcaaagttgatgagctagtgaaagacagaattgaagcacaaaatgaagtgaagtct
aaagagaaagaagaaaaggacgtagttgcacagcagaacatgtatgctcaattgttacct
cttgctttgcctgccccaccaatgcctggaatgggaggaccaggttatggaggaagctac
gggcctccccctccagtgagtggaatggggatgccccaaatgcctccttttgggatgcca
cccatgggtagcagttactaa

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