Medicago truncatula (barrel medic): 11420719
Help
Entry
11420719 CDS
T01716
Name
(RefSeq) clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04142
Lysosome biogenesis
mtr04144
Endocytosis
mtr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
11420719
04142 Lysosome biogenesis
11420719
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
11420719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11420719
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
11420719
Membrane trafficking [BR:
mtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
11420719
Exosome [BR:
mtr04147
]
Exosomal proteins
Proteins found in most exosomes
11420719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
11420719
NCBI-ProteinID:
XP_003616661
UniProt:
G7K259
LinkDB
All DBs
Position
5:36929015..36942437
Genome browser
AA seq
1706 aa
AA seq
DB search
MAAANAPIAMKEVLTLPSVGINAQFITFTHVTMESDKYICVRETSPQNSVVIVDMSMPNQ
PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIELKTKMKSHQMPEQVVFWKWI
SPKMLGLVTQTSVYHWSIEGDSEPVKVFERTANLANNQIINYRCDPTEKWLVLIGIAPGS
PERAQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSVLISFASKTFNAGQVIS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEATSAGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLEL
AVSLAKRGNLPGAEKLVVERFHELFSQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILVYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGSPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLANLRGNLQIIVQVAKEYSEQLSVEGCIKIFEQFR
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPENFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTSKNSLFKLQARY
VVERMDGDLWDKVLNPDNEYRRQLIDQVVSTALPESSSPEQVSATVRAFMTADLPHELIE
LLEKIVLQNSAFSGNHNLQNLLILTAIKADSSRVMDYINRLDNFDGPSVGEMAVEAQLYE
EAFAIYKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQTAKAQLREGLVSDAIE
SFIRADDTTQFLDVIRAAEDANVYHDLVKYLLMVRQKAKEPKVDGELIYAYAKIDRLSDI
EEFILMPNVANLQTVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLQQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGYFNELISLMESG
LGLERAHMGIFTELGVLYARYRPDKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTFLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLEEHPDLINDILNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSSNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGE
RELAEELLVYFIDQGKKECFASCLFVCYDLIRADVVLELAWMHNMIDFAFPYVLQFIREY
TGKVDELVKDRIEAQNEVKSKEKEEKDVVAQQNMYAQLLPLALPAPPMPGMGGPGYGGSY
GPPPPVSGMGMPQMPPFGMPPMGSSY
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgaacgctccgatcgccatgaaagaagtcctaaccttaccgagtgttgga
atcaatgcacaattcatcacattcacgcatgtgacgatggaatcagacaagtatatatgt
gttcgagaaacgtctccacagaatagtgttgttattgttgatatgagcatgccaaatcaa
cctttgaggaggccaattactgcggattccgctcttatgaatcctaattctagaatcctt
gctttgaaagcccaactccaagggactacacaggatcacctacaaatatttaacattgaa
ttgaaaacaaagatgaaatcgcatcagatgcctgagcaggtagtcttttggaagtggatt
agccccaaaatgttgggcctcgtgacacaaacctcagtataccactggtccattgaaggt
gattctgaacctgttaaggtatttgagagaacagcaaatttggcgaacaaccagataatc
aattatcgatgcgaccctacagaaaaatggttggtcttgattggtatcgctcctggttcc
cccgagagggcacaattggttaaagggaacatgcagcttttctccgtggatcagcagcgt
agtcaggctcttgaagctcatgctgcatcatttgcccaattcaaagttcctgggaatgaa
aatccgtctgttttgatttcttttgcctcaaagacatttaatgctggtcaagttatatcg
aagttacatgtcattgaactgggcgcacagccagggaagccatcatttacaaagaaacaa
gcagatctcttcttccctccagattttgctgatgactttccagttgcaatgcagatatcc
cacaaatatagtttgatttatgtgatcaccaaacttgggctactttttgtatatgatttg
gagacagctaccgctgtatataggaacaggattagtccagatcctatatttttgacatca
gaagccacatcagcaggaggcttttatgccattaataggagaggccaagttttgttggcc
actgtcaatgaacaaacaattgtgaattttgtcagcggtcaattaaacaatttggagcta
gctgttagtcttgcgaaaagagggaatcttcctggtgctgagaagctggttgtggagcgt
tttcatgaattgttttcccaaacaaagtataaagaagcagcagagcttgctgctgaatct
ccacaaggaatccttcggacccctgacacagttgccaaatttcagagtgttcccgtgcaa
gctggtcaaacgccgccgctgctgcagtattttggaacacttttaacgagaggaaagctg
aatgccttcgaatcattagaattgtctcggttggtagtgaaccagaacaagaaaaacctg
ttggaaaattggttggcagaggacaagcttgaatgcagtgaggagctaggagatctcgtt
aagactgtggacaatgatcttgctttaaaaatatacatcaaagccagagctactccgaaa
gttgttgctgcttttgctgagaggagggagtttgataagattctggtctactctaagcag
gttggatacacacctgactaccttttcctcttgcaaacaattctccgaacagatcctcag
ggtgctgttaattttgcattaatgatgtctcaaatggagggaggtagcccaattgattac
aacaccataactgatctgtttcttcagagaaacctgatccgtgaggcaacagcttttctc
ctggatgttttaaagccaaatttacctgaacatggattccttcaaacaaaggtgttggag
ataaatctggtcactttccctaatgttgctgatgctattttggctaatggcatgttcagc
cattatgaccgtcctcgtgttgcccagctttgtgaaaaagctggcctttacgtgcgagct
ttgcaacattacacagagttaccagatataaaacgtgttattgttaatacacatgctatt
gagcctcagtcacttgtagaattttttggtactctctcacgagaatgggcattagagtgc
atgaaagacttgttactggccaatcttaggggcaatttacagattattgtgcaggttgcc
aaagaatattctgaacaattgagcgttgaaggttgcattaaaatttttgagcagtttagg
tcatatgaagggctgtacttttttcttggctcatatttgagctccagcgaggaccccgac
attcatttcaagtatattgaggcagcagcgaagactggtcaaatcaaggaggttgagcgt
gtgacaagagaatccaatttctatgatgccgaaaaaacaaagaacttcctaatggaggct
aagcttccagatgcacgacctttaatcaatgtttgtgatcgatttgggtttgttccagat
ctgacacactacctatacacaaacaacatgcttcgctacattgaaggttatgttcagaag
gtgaacccagggaatgctcctttagttgttgggcagctgctagatgacgagtgccctgaa
gattttatcaaaggtttgattctttctgttcgttccttgctgccagtggagccccttgtg
gaggagtgtgagaagaggaatcgccttcgtttgctcacacagtttttggaacatctcgtg
agtgagggaagccaggatgtacatgttcacaacgccctgggtaaaattatcattgatagc
aacaacaacccagaaaattttctcacaaccaacccttactatgattctcgagttgtgggc
aagtattgtgagaaacgcgacccaaccttggcagttgtagcttaccggcgaggacaatgt
gatgaagaacttatcaatgtcaccagtaaaaattctttgttcaaactgcaagcaaggtat
gtcgttgagagaatggacggcgatctttgggataaagttcttaatcctgataatgaatat
agaaggcaacttattgatcaggttgtatctactgctttgcctgaaagctcaagccctgaa
caagtttctgcaactgttagggctttcatgacagctgatctgcctcatgaattgattgaa
cttctcgagaagattgtccttcagaattctgcattcagtgggaaccacaatttgcagaat
cttctcattttgacagcgataaaggctgattcatccagagttatggattatatcaataga
ctggataattttgacgggccttcagttggggaaatggctgtagaagcacagttgtatgag
gaagcatttgcaatttacaagaagttcaacttgaatgttcaagcagtcaatgtgttgctt
gataatattcgcagcattgatagagctgttgagtttgctttcagagttgaagaagacgct
gtttggagtcagacggcaaaggctcaactcagggaagggcttgtaagtgatgcaatagag
tcatttatacgagcagatgatactacacaatttttggatgttatccgtgctgctgaagat
gccaatgtttaccatgacttggttaaatacttgttaatggtaagacagaaggcaaaagaa
ccaaaggttgacggcgagctcatttatgcatatgcaaaaattgacaggcttagtgacatt
gaagagttcattctgatgccaaatgttgctaatttgcaaactgttggggaccggttgtat
gatgaagcattatacgaggctgcaaaaatcatatttgcctttatatctaactgggccaag
ttggctattacactggtcaaattacaacaattccaaggggcagttgatgcagctaggaaa
gctaacagctcaaaaacatggaaggaagtttgttttgcgtgtgttgatgcagaggagttt
cgtttggcccagatatgtggactcaacattattattcaggtggatgacttggaagaggtc
agtgaatattaccaaaatagaggttacttcaatgagttaatatctctcatggagagtggt
ttagggttagaacgagcacatatgggcatcttcaccgagctaggagttctttatgctaga
taccgccctgataagcttatggagcatatcaaactattctcaacccgcctcaatatccca
aaacttattagagcatgtgatgaacaacaacattggaaagaattgacctttttgtatatc
caatatgatgagtttgataatgccgcaactaccatcatgaaccattcacctgaagcgtgg
gatcacatgcagttcaaggatgttgccgtcaaagttgctaatgttgagttgtattacaag
gctgttcacttctatctggaagaacatccagacctcatcaatgatattctgaatgtcctt
gcacttcgtgtggaccacacacgtgttgttgacatcatgcgtaaggctggtcacctccgt
cttgtgaagccatacatggttgcagttcagagcagcaacgtttctgctgttaatgaagcc
ctgaatgagatatatgttgaggaggaagattatgatagattgcgggagtcaattgatttg
catgataatttcgatcaaataggccttgcacaaaagattgaaaagcatgagcttcttgag
atgaggcgtgttgctgcttatatttacaagaaggcaggaaggtggaagcagtccattgct
ttatcaaagaaggacaacctttacaaagatgccatggagacagcttcacaatctggcgag
cgtgaacttgccgaggagttgcttgtttatttcattgatcagggaaagaaggaatgcttt
gcctcatgtctatttgtttgctatgatttaatacgagcagacgttgttcttgaactagct
tggatgcacaatatgattgactttgccttcccatacgtcttgcagtttatccgtgaatac
actggcaaagttgatgagctagtgaaagacagaattgaagcacaaaatgaagtgaagtct
aaagagaaagaagaaaaggacgtagttgcacagcagaacatgtatgctcaattgttacct
cttgctttgcctgccccaccaatgcctggaatgggaggaccaggttatggaggaagctac
gggcctccccctccagtgagtggaatggggatgccccaaatgcctccttttgggatgcca
cccatgggtagcagttactaa
DBGET
integrated database retrieval system