Medicago truncatula (barrel medic): 11421055
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Entry
11421055 CDS
T01716
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11421055
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
Other 90S particles
11421055
Pre-60S particles
Other pre-60S particles
11421055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR41
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
11421055
NCBI-ProteinID:
XP_003617999
UniProt:
G7K4Y5
LinkDB
All DBs
Position
5:complement(44037314..44044877)
Genome browser
AA seq
485 aa
AA seq
DB search
MIAAISWIPKGVSKAEPVFAEPPSKDEIEEIISNTLTSVGDEDENEEDANKQNDEVAHAL
TVAGAIGKPSNGNSDDISDALKDLNMDNYDEEDDKGFELFSSGNGDLFYQSNELDPYIND
KNEEYDSEDMEDMIINPTDSVVVCARTEDDVNFLEVWILEDANTRDMNLYIHHDIIIPEF
PLCTAWLDCPLKGGEKGNFLAVGSMGPSIEIWDLDVIDEVEPCVVLGGKEKRKKGKNGKK
KSAKYKEDSHTDSVLGLAWNKEYSNTLASASADKRVKIWDIVAGKCTITMDHHSDKVQAV
AWNHRAQQILLSGSFDHTVALKDVRTPSHSGYTWSVSADVESLAWDPHTEHSFAVSLEDG
TIQCFDVRTAMSNATSVQNATFTLHAHDKSVTSVSYNTAAPNLLATGSMDKTVKLWDLSN
NQPSSVASKEPKAGAVFSISFSEDNPFLLAIGGSKGKLQLWDTLSDEGISRRYGKFNRNQ
PQSVA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgcaatatcgtggattcccaaaggggtttcaaaagcagaacccgtttttgct
gaacctccttctaaagatgaaattgaagaaatcatctccaacactctcaccagtgtagga
gacgaagatgagaatgaagaagatgctaacaaacagaacgatgaagtcgcacatgcttta
accgtagctggtgcaattggtaaaccatccaatggaaatagtgatgatatttccgacgcc
ttgaaggatctcaacatggataactatgatgaagaggatgacaaaggatttgagttattc
agttcggggaacggtgatcttttttatcagagtaatgaattggatccatacatcaacgat
aaaaatgaggagtatgattctgaagatatggaagacatgattattaatccaactgattct
gttgttgtttgtgcacgtactgaggacgatgtcaattttcttgaagtatggatacttgag
gacgccaatacccgcgatatgaacttgtatattcaccatgatatcattattccggaattt
ccactttgcacagcatggcttgattgcccccttaaaggcggagaaaaagggaacttcttg
gctgttggttcaatgggaccatccattgaaatttgggaccttgatgttattgatgaggta
gagccatgtgtggtgttgggtggcaaagagaaaagaaaaaaggggaaaaatgggaaaaag
aaatcagcaaaatacaaagaggacagtcacaccgactcagtacttggtcttgcttggaac
aaggaatacagtaatacacttgcaagtgccagtgctgacaagcgagtgaagatttgggat
attgttgctggaaagtgtactattacaatggatcatcactctgataaggttcaagcagtt
gcttggaatcatcgtgcacaacagatccttcttagtggttcgtttgatcatactgttgcc
ttgaaggatgtaaggacgccgtcacattctggctatacgtggtcggtcagcgctgatgta
gagagcttggcatgggatccacacaccgagcactcttttgcggtgagtcttgaagatggt
acgatccaatgttttgatgttcggactgcaatgtccaatgccacatctgtgcagaatgct
acttttacacttcatgcacacgataaatctgttacctccgtatcctataatacggcagca
cctaatcttcttgcgactggatccatggataaaacggtaaaactttgggatttgtctaac
aaccaaccatcttctgttgcatctaaagagccaaaagctggggctgtcttttctatctcc
ttctcagaggacaacccattcttgttggccataggaggctcaaagggaaagttacaatta
tgggacaccttgtctgacgaaggcatctctcgaagatacgggaaatttaacaggaatcaa
cctcaatccgtggcctga
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