KEGG   Medicago truncatula (barrel medic): 11421076
Entry
11421076          CDS       T01716                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mtr04121]
    11421076
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     11421076
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 11421076
NCBI-ProteinID: XP_003618155
UniProt: G7KQ08
LinkDB
Position
6:complement(676104..680556)
AA seq 504 aa
MAPRKSQSFFNLTTSRELNSFRVRKRPNYDGWFHGFLDVGAVATQHNGEDVVPLALSFAK
TSKFCHILALSNEEGYVSFFDTRRKFAVPQCLERNAEEARICEWSSHNNAVFDVNWIKDD
TQILTASGDQTVKVWDVQEKKCLGVLTGHTGSVKSISSHPTNPDILVSGSRDGSFRLWDL
RCNSNSNRRGEVRICSTDVVNGAHILYQGLRPRRGKVASNSVTSVLWLKDQVSIATAGAV
NSVVKFWDTRNLKSIVTQACPEPGKQRLHGISSLSQDDSGLLLSASCMDSRVYLYNTLQL
EKGALRYFEGGRIESFFIKAAISPDASNIVCGSSNAKAYVWQVDKPQVEPTILKSHYEEV
TAVDWCRSDNGKLATASDDFSIHIWNKRSSVTTSKTPFSIRRRVMAIPRTECKMLLDNEE
TCPKSSDYVLLSNEEPNDPVKSATPITPPKTTTSEGHKNQLLSEFDLTISPKNTPESALK
SPSSVLNPPPSLKRTIRDYFVASS
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggctcctcgaaaatctcaatccttcttcaacctcacaacttcacgcgagctcaattcc
ttccgagttcgaaaaagacctaattacgatggatggtttcacggattcttagatgttgga
gctgtagctactcagcataacggtgaagacgttgttcctcttgcgctttcgttcgctaag
acttcgaaattttgtcatattcttgctttgtctaatgaggagggatatgttagctttttt
gatactcgtcgaaaatttgcggtgcctcagtgtctagaaagaaatgcagaggaagcgagg
atttgtgaatggagttcgcataataatgcagtttttgatgtcaattggattaaggatgat
acacagatcctcactgcttctggtgatcaaacggttaaggtatgggatgttcaagaaaag
aagtgtcttggagtgttaacagggcacacaggaagtgtgaaatctatttcttctcatcca
actaatcccgatatcttagtctctggttcaagagatggatcttttcgtctttgggactta
agatgtaactccaattcgaatagacgtggagaagttaggatatgttcaacggatgttgtc
aatggagcacatattctgtatcaaggactacgaccaaggaggggcaaggttgcttccaat
agtgttacatctgttctttggctcaaggatcaagtttccatagccactgctggggcagta
aatagtgtggtgaagttttgggataccagaaatttaaaaagtattgtcacacaagcatgt
cctgaaccaggaaagcaaagattacacggtatatctagcttgtcccaagatgacagtgga
ctgttgctttctgcttcctgcatggatagccgagtttatctatataatacacttcaactt
gaaaagggggctttgagatactttgaaggaggtcgtattgaatcattttttattaaggct
gcgattagccccgatgcatctaacatcgtttgtggttctagtaatgcaaaagcatatgtt
tggcaggttgacaagcctcaagtggaaccaactattttgaagagtcattacgaggaagtt
actgcagttgactggtgccggtctgacaatggaaaattagcaactgcttctgatgatttc
tctatccatatatggaataaacgcagttctgttacaacatcaaagactccattttccatc
cgaagaagggttatggccatacctagaacagagtgcaaaatgctactagacaatgaagaa
acttgtcctaagtcaagtgactatgttctactatccaatgaagaaccaaatgacccagta
aagtcagccactccaatcacaccacctaaaacaactacatctgaagggcacaagaaccag
cttttatcagaatttgatctaaccatatctcctaaaaacactccagagtctgctttgaag
agcccttcgtctgtattgaatccaccgccctccctaaagagaactatccgggactacttt
gtagcatcttcttga

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