Medicago truncatula (barrel medic): 11421076
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Entry
11421076 CDS
T01716
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11421076
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
11421076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
11421076
NCBI-ProteinID:
XP_003618155
UniProt:
G7KQ08
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Position
6:complement(676104..680556)
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AA seq
504 aa
AA seq
DB search
MAPRKSQSFFNLTTSRELNSFRVRKRPNYDGWFHGFLDVGAVATQHNGEDVVPLALSFAK
TSKFCHILALSNEEGYVSFFDTRRKFAVPQCLERNAEEARICEWSSHNNAVFDVNWIKDD
TQILTASGDQTVKVWDVQEKKCLGVLTGHTGSVKSISSHPTNPDILVSGSRDGSFRLWDL
RCNSNSNRRGEVRICSTDVVNGAHILYQGLRPRRGKVASNSVTSVLWLKDQVSIATAGAV
NSVVKFWDTRNLKSIVTQACPEPGKQRLHGISSLSQDDSGLLLSASCMDSRVYLYNTLQL
EKGALRYFEGGRIESFFIKAAISPDASNIVCGSSNAKAYVWQVDKPQVEPTILKSHYEEV
TAVDWCRSDNGKLATASDDFSIHIWNKRSSVTTSKTPFSIRRRVMAIPRTECKMLLDNEE
TCPKSSDYVLLSNEEPNDPVKSATPITPPKTTTSEGHKNQLLSEFDLTISPKNTPESALK
SPSSVLNPPPSLKRTIRDYFVASS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcgaaaatctcaatccttcttcaacctcacaacttcacgcgagctcaattcc
ttccgagttcgaaaaagacctaattacgatggatggtttcacggattcttagatgttgga
gctgtagctactcagcataacggtgaagacgttgttcctcttgcgctttcgttcgctaag
acttcgaaattttgtcatattcttgctttgtctaatgaggagggatatgttagctttttt
gatactcgtcgaaaatttgcggtgcctcagtgtctagaaagaaatgcagaggaagcgagg
atttgtgaatggagttcgcataataatgcagtttttgatgtcaattggattaaggatgat
acacagatcctcactgcttctggtgatcaaacggttaaggtatgggatgttcaagaaaag
aagtgtcttggagtgttaacagggcacacaggaagtgtgaaatctatttcttctcatcca
actaatcccgatatcttagtctctggttcaagagatggatcttttcgtctttgggactta
agatgtaactccaattcgaatagacgtggagaagttaggatatgttcaacggatgttgtc
aatggagcacatattctgtatcaaggactacgaccaaggaggggcaaggttgcttccaat
agtgttacatctgttctttggctcaaggatcaagtttccatagccactgctggggcagta
aatagtgtggtgaagttttgggataccagaaatttaaaaagtattgtcacacaagcatgt
cctgaaccaggaaagcaaagattacacggtatatctagcttgtcccaagatgacagtgga
ctgttgctttctgcttcctgcatggatagccgagtttatctatataatacacttcaactt
gaaaagggggctttgagatactttgaaggaggtcgtattgaatcattttttattaaggct
gcgattagccccgatgcatctaacatcgtttgtggttctagtaatgcaaaagcatatgtt
tggcaggttgacaagcctcaagtggaaccaactattttgaagagtcattacgaggaagtt
actgcagttgactggtgccggtctgacaatggaaaattagcaactgcttctgatgatttc
tctatccatatatggaataaacgcagttctgttacaacatcaaagactccattttccatc
cgaagaagggttatggccatacctagaacagagtgcaaaatgctactagacaatgaagaa
acttgtcctaagtcaagtgactatgttctactatccaatgaagaaccaaatgacccagta
aagtcagccactccaatcacaccacctaaaacaactacatctgaagggcacaagaaccag
cttttatcagaatttgatctaaccatatctcctaaaaacactccagagtctgctttgaag
agcccttcgtctgtattgaatccaccgccctccctaaagagaactatccgggactacttt
gtagcatcttcttga
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