Medicago truncatula (barrel medic): 11421085
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Entry
11421085 CDS
T01716
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11421085
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
11421085
REST complex
11421085
Heterochromatin formation proteins
Other heterochromatin formation proteins
11421085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
11421085
NCBI-ProteinID:
XP_003618393
UniProt:
G7KJX2
LinkDB
All DBs
Position
6:complement(2452431..2461859)
Genome browser
AA seq
1387 aa
AA seq
DB search
MKRARDDIYSASASQFKRPFGSSRGDSYGQGPGGGGGGGGGGVNGGGGGGGGATTSQKLT
TNDALSYLKEVKNMFQDQKEKYDMFLEVMKDFKAQKTDTTGVIARVKELFKGHNHLIFGF
NTFLPKGYEITLDEDEDEAPPKKTVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNMYRK
EHKTITEVYSEVATLFKSHGDLLDEFTRFLPDNSSAPSTQHAPFGRNSMQRLNERSSMAP
MMRQMQVDKQRYRRDRFSSHDRDISVERPDLDDDKTMMNFHKEQRKRESRDRRMRDHDDR
EHDLDNSRDLHSQRFPDKKKSVKKTEAYDFAAHDDKDGMKLMYSQAISFCDKVKEKLSSA
EDYQTFLKCLNIFGNGIIKKNDLQNLVTDLLGKHSDLMSEFNDFLERCENIDGFLAGVMS
KKPLAGDGHLSRSSKLEDKEHRRETDGGKEKERYKEKYMGKSIQELDLSDCKRCSPSYRL
LPADYPIPTASQRSELGAHVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELD
MLLESVSSAAKRADELYNSIVENKISVESLSRIEDHFTVLNLRCIERLYGDHGLDVLDIL
RKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWADIYSKNHYKSLDHRSFYFKQQDSKNL
STKSLVTEIKEIKEKQQKEDDIVQTIAAGAKHPLIPHFEFDFSDAEIHEDLYKLVRYSCE
EVFQSKELFNKIMRLWSTFLEPMLGVTSQSHETERAEDRKVGHNARSSVAPNVGGDGSPN
RESNSRLPKSDKNEVDGRVGEVKNGHRTSVAANDKENGSVGGELVSRDDHLMDNKGQKSV
ESSDKAPGFVKQFSSDEQAARNSASVTIRGESSVHMSPGRVLTPTRPTDADVSVAVVIAK
SPSVNVPLVEGVAAAPPVPVANGVLVENSKVKSNEESSVPCKVEKEEGELSPNADSEEDN
FVAYGDSNAQSNQNDDRRKYESRNGEDEHRPEAGGDNDADADDEDSENVSEAGEDVSGSE
SAGDECSREDHEEEDMEHDDVDGKAESEGEAEGMCDADAQTGVDGSSLPLSERFLSTVKP
LTKHVSAVSFVEDVKDSRVFYGNDDFFVLFRLHQILYERILSAKENSTSAEIKWKTKDAS
STDLYARFMDALYNLLDGSAENAKFEDECRAILGNQSYVLFTLDKLIYKLIRQLQTVATD
EEDAKLLQLYEYEKSRKPGKLNDSVYHSNAHVILHEENIYRFQCSSSSSRLSIQLMDNMN
EKPEIAAVAVDPDFSFYLHNDFLSVLPGKKEPHGILLERNKPKYGDLDELSAICAVMEDV
KVVNGLECKISCNSSKISYVLDTQDFFFRPRRKRRTSSTTSSSSSTASSRSRREREERFR
KLMASST
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggctagagatgatatttactctgcttctgcttctcaattcaaaagacccttt
ggttcatcacgtggtgattcctatggtcaaggccccggaggtggcggtggcggtggtgga
ggtggagttaacggaggaggaggaggaggtgggggagcaactacctcccagaaattgaca
accaatgatgctttatcctatttgaaggaagtgaaaaacatgtttcaggatcaaaaagaa
aaatatgacatgttcctcgaggtcatgaaagatttcaaggctcaaaagactgacactact
ggtgtcatagcaagggttaaggaactattcaaaggtcacaaccatttgatttttggattt
aacactttcctgccaaaggggtatgaaataacacttgatgaggatgaggacgaagctcct
ccgaagaaaacagttgaatttgaagaagctattagttttgtgaacaagattaagaaacgt
ttccaaaatgatgaacatgtttacaaatcatttttggacattttgaatatgtatcgcaaa
gagcacaagaccatcactgaggtttatagtgaggttgctaccctttttaagtcgcatgga
gatttgctcgatgagttcactagattcttaccagataattcttcagcaccttccacacag
catgctccatttggtcgaaattcaatgcagcgcctcaatgagcggagttctatggcaccc
atgatgcggcaaatgcaagtagataagcaacgatatcggcgagaccgattttcttctcat
gatcgtgatataagtgttgaacgtcctgatctggatgatgacaaaacaatgatgaacttt
cacaaggagcagaggaagcgtgagagcagggatagaaggatgcgcgatcacgatgataga
gaacatgatcttgataacagcagggatttgcactcacaacgctttcctgacaaaaagaaa
tctgttaagaagactgaagcttatgactttgctgctcatgatgataaagatggaatgaag
ctcatgtatagtcaagcaatcagtttctgcgataaagttaaggagaagttgagcagcgct
gaggactaccaaacattcttgaagtgccttaatatttttggcaacggaattataaaaaag
aatgatttacaaaatttggtgaccgatttacttggaaagcattctgatctcatgagcgaa
ttcaatgatttcttagagcgttgtgaaaatattgacgggttccttgctggtgtcatgagt
aaaaagccacttgctggtgatggtcatttatctcgatcatccaagttggaggacaaagaa
cataggcgtgagacggatggaggtaaagagaaggaaagatacaaggagaagtacatggga
aaatccattcaagaacttgaccttagcgactgcaaacgttgttctccgagctaccggctt
ctaccggccgattatccaattcctactgctagtcagcgatctgagcttggtgcacatgta
ctgaatgatcactgggtatctgtgacttccggaagtgaggattactctttcaaacatatg
cgcaggaatcaatacgaagaaagcttattcagatgtgaagatgacaggtttgagctggac
atgttattagagtctgtgagttccgctgctaaacgagctgacgagttatataacagcatt
gttgaaaataagattagtgtggagagtctaagccgtattgaagatcacttcactgttctg
aatctaaggtgcattgaacgcctatatggtgaccatggtcttgatgtcttagacatactg
cgtaagaacccaactcatgctctgcctgtaatattgactcgattgaagcagaaacaagag
gagtggaataggtgtcgttcagatttcaataaagtttgggctgacatttattctaaaaat
cactacaaatcacttgatcatcgtagcttctatttcaagcaacaagattcaaagaacttg
agcacaaaatctttggtgactgagatcaaagaaattaaagagaagcagcagaaagaggat
gacatcgttcagactattgctgcaggagctaaacatcctctcattccacattttgagttt
gacttttctgatgctgaaattcacgaggacctgtataaacttgttcgttattcatgtgag
gaagtattccaaagtaaagagttattcaataaaattatgaggctctggagtaccttcttg
gaaccgatgcttggtgtaacttcccaatctcatgagacggaaagggccgaggacaggaaa
gtaggacataacgctcgaagttctgttgcacctaacgtaggaggtgatggaagccctaac
agagagtcgaattcaaggctaccaaaatctgacaagaatgaagttgatggtagagtaggt
gaagttaaaaatggtcaccggactagtgtagctgccaatgataaagaaaatggttctgtt
ggtggcgagcttgttagtagagatgatcatttaatggataataaagggcagaaaagtgtt
gaaagcagtgataaagcccctggatttgttaaacagttctcctctgatgaacaagcagcg
agaaactctgcatctgtcacaattagaggcgaaagcagtgtgcatatgtccccaggtcgc
gtacttactccaacccgacctactgatgctgatgtctctgttgctgtagtcatagccaag
tctccgagtgttaatgtacctttggtggagggcgttgccgctgcacctccagtaccagtg
gccaatggcgtgttagttgagaacagtaaagttaaaagcaatgaagaatcttctgtgcct
tgcaaagttgaaaaagaagagggtgagttatccccgaatgctgactctgaggaggataac
tttgttgcctatggagattcaaatgcacagtcaaaccagaatgacgatagaaggaaatac
gagtctagaaatggggaggacgagcaccgtccagaggctggaggtgataatgatgcagat
gctgatgacgaagacagcgaaaatgtttctgaagctggtgaagatgtgtcaggaagtgag
tctgctggtgatgaatgctcccgggaagatcatgaggaggaagatatggaacatgatgat
gttgatggtaaagccgaaagtgaaggtgaagcagaggggatgtgtgatgctgatgcacaa
actggagtagatggctcatctttaccgttatcagagaggttcctgtcaactgtgaaacct
ctcacaaagcatgtatctgcagtttcatttgttgaagatgtgaaggattcaagggtgttt
tacggaaatgatgatttctttgttctctttaggcttcatcaaattctttatgaaaggatc
ttatctgcaaaagaaaattcaacaagcgctgaaattaaatggaaaacaaaagatgctagt
tccacagatctttacgcaagatttatggatgcattgtacaatttgctcgatggatccgcc
gagaatgccaagttcgaagatgaatgtcgagcaattcttggaaaccagtcttatgtgcta
ttcacattggacaagttaatatataaattaatcagacagcttcaaactgttgcaaccgat
gaggaagacgctaagcttctccaattatacgagtatgaaaagtctcgaaaacctgggaaa
ttaaatgattcagtgtatcattcaaatgcgcatgtcatccttcacgaggagaacatatat
cgttttcaatgttcatctagttcctctcggctctccatccagctcatggacaatatgaat
gaaaagcccgagattgctgctgttgctgttgatccagatttttcattttatctgcacaat
gattttctgtctgtcctccccggcaaaaaggagcctcatggcattttactggaaagaaac
aaaccaaaatatggggacttagatgagctttctgcaatttgtgctgtaatggaagatgtc
aaagtagttaatggattggaatgcaagatatcttgcaactcatccaagatttcttatgtt
cttgacacacaagattttttcttccgaccaagaaggaaaaggcgaacatcatcaacaaca
tcatcatcatcaagtacagcatcttctcggtctcgcagggaaagagaggaaagattccgc
aaattgatggcgtcctccacctaa
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integrated database retrieval system
