Medicago truncatula (barrel medic): 11421104
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Entry
11421104 CDS
T01716
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11421104
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
11421104
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Helicases
11421104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
B12-binding
AAA_22
Motif
Other DBs
NCBI-GeneID:
11421104
NCBI-ProteinID:
XP_003622915
UniProt:
G7L177
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All DBs
Position
7:complement(26996495..27006402)
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AA seq
798 aa
AA seq
DB search
MAEASIKKSKRKNRTVKPHDAELDRFDSLPWNSSIPQPDENDDNDASFSLFTGSNELEGG
FLSLEEIDEAEYGLNIPDPENHDRKHNSKPDKKSNKQKQDGACSGGETMNDESIKSEVKK
KKKKKKNKDAKENQKVELSNTGVNADVKDSVDEENIDETEYYAWNELRLHPRLMKAIHKL
GFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKAESISGVNG
EEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRVTAIVGGILPEKQERLLK
ARPEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMS
NISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFRKKLKRGSIQKKQLSTDGLD
SIETLSERAGMRPNAAIIDLTNPSILAAKIEESFIECTEDDKDAHLYYILTVHGQGRTIV
FCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFRENDNGILVATDVAARGLD
IPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPKETSKFASLCKSFSKDNFQ
RFPVENSYMPEVLKRLSLARQIDKITRKDSQEKAEKSWFDRNASSVDLVTENYDSEEEQV
NKCRQKKASSKQLKKLQMELSMLISRPLQSKTFSHRYLAGAGVTPLLQEQLQQLARQKIS
DRQGAGFGKKGRLVVIGQDCVDALHALRSAGEEVRMDTKDSTRGQRNMVNAKRKRKEEKT
RLRDQRKKKKKNQNEDDE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcttcgataaaaaaatctaagaggaagaaccgaaccgtaaaacctcacgac
gctgaactcgaccgattcgattcacttccatggaactcttcaattcctcaacccgatgaa
aacgacgataacgacgcctctttttctctcttcactggctctaatgaacttgaaggaggt
tttctttcactggaggagattgatgaagctgagtatggattaaatattcccgatcctgaa
aatcatgacaggaagcacaactctaaaccggacaagaagtcaaataagcagaagcaagac
ggtgcttgtagtggcggagaaacgatgaatgatgagagcatcaagtctgaagtgaagaaa
aagaaaaagaagaagaaaaacaaggatgcaaaagaaaaccagaaagttgaactttcaaat
actggtgtgaatgctgatgtgaaggacagtgttgatgaagagaacattgatgaaactgaa
tattatgcatggaacgagttgaggcttcatcctcgtttaatgaaagcaatacacaagttg
ggattcaaggaaccaacaccgatacagaaagcatgtgttccggctgctgctcatcaaggg
aaggatgttattggggctgcagagacaggatctggtaaaacacttgcgtttggtttgccc
attttgcaacgtcttttggaggagcgtgaaaaggctgaaagtataagtggggtaaatggt
gaagaagctgctgaaaaatacgctactacgggccttttgaggagtcttattattgctcca
acaagagaacttgcacttcaggtagccaagcatctgaaagcagtagccaagcatattaat
gttagggtgaccgctatagttggaggtattttaccagaaaagcaggaaagacttttaaaa
gcaagacctgagattgtggtcgctactccagggaggttatgggaacttatgtcatctgga
gaaaaacatttaattgagttacattcattgtctttctttgtgcttgacgaggctgatcga
atggtacaaagtggtcattttaaggagttacaatcaataattgacatgcttcccatgtcc
aatatctccagtgaagataattctaaagatgcacaaaattgtgttacagtttctagcatc
caaaaaaagaaaaggcaaactcttgttttttcagcaactgtcgcactgtccgctgatttt
cgcaagaagttaaagcgtggttcaattcagaaaaagcaactatcgacagatggtttggat
tctattgaaactctttctgagagagcaggaatgagacccaatgctgcaattattgatctt
accaatccatcaatattagcagctaagattgaagagtcctttattgaatgcaccgaagat
gataaagatgcccatttgtattatattcttactgtccatggtcaaggccgcacaatagtt
ttttgtacgtcaattgcagctttgcgtcatatttcttccatattgcgcattcttggcgtt
aatgtttggactcttcatgctcaaatgcagcagcgagcgcgtttaaaggccatggaccgc
tttcgtgaaaatgataatggcatacttgttgctacagatgttgctgcaaggggtcttgat
attcccggtgttagaactgttgtccactaccagcttccacattcagcagaggtttatgtt
catagaagtggaagaaccgctagagcttctgccgaaggctgtagcattgctttaatctcc
ccaaaagaaacatcaaagtttgcttcattgtgcaagtcattttcaaaggacaactttcag
cgatttcctgtggagaattcatacatgcccgaggttctgaaacgtttgtctcttgcacgt
caaatagacaagataactaggaaggattcccaggagaaggcagaaaaaagctggtttgat
cggaatgctagttcagtggatttagttactgaaaattatgacagcgaggaggaacaagtt
aataaatgtaggcaaaagaaagccagctctaagcaattgaagaaattgcagatggagctc
agtatgctgatttcacgtcctttgcaatcaaaaacattttcacatcgatatttagcaggg
gctggtgtaacacccctcttgcaagaacaattgcaacaattagcaaggcaaaaaataagt
gatcgccagggtgcagggttcggcaaaaagggaagattggttgtgattggtcaagattgt
gtggatgcacttcacgcacttcggagtgctggtgaagaggtgcgcatggataccaaggat
tcaacacgaggacaaagaaatatggtgaatgcaaagagaaaaagaaaagaggaaaagaca
cgtttgcgtgatcagcgtaaaaagaagaagaaaaatcaaaacgaggatgatgaatag
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