KEGG   Medicago truncatula (barrel medic): 11421150
Entry
11421150          CDS       T01716                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5 isoform X1
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mtr03041]
    11421150
Spliceosome [BR:mtr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    11421150
 Complex B
    11421150
SSDB
Motif
Pfam: zf-CCCH RRM_1 RRM_MUD2_C zf-CCCH_4
Other DBs
NCBI-GeneID: 11421150
NCBI-ProteinID: XP_024631915
LinkDB
Position
2:171021..177040
AA seq 764 aa
MWSNRKEKRKALKKLKRKERRKEIAEKERLEEEARLNDPEEERKRILLEQQEAERIERDR
IAFEEREKAWIIKQQQQRDLEEEQQQLSQRDLEQHESELEEEEEEDVDDDDDGRPEIIWL
GNEIIIQKKNPNPLLLLHNHNHHHHHHHHQEQHEHHDNRPTSNPFPPESPSQPLHNVAQQ
PPNFGTELDKAHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGL
EYTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYN
SVNGRYFAGKQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIHCFRNPGGDYEWA
DSDKPPPKFWVKEMVALFGHSDNCEMSRVHGNFSALKHSSNILETDSDRYHSRRSRSREM
GQLYGGRSSRRRQEDERKQRTLDEEWNTNYKDNHKRKYRNKTSDSDSDKEGLEEVDRKKY
HEHTRKSSFNWNKDDNSRRHEEYSDVDRVTINRDNEKPHDRKGRNSQKSNRDSRDWIYEA
GCDEDRDGDGRKHHISRRKGSRHQSRDNSNVTDESESDKDRGHEEYSDVDWDTMSRENEK
QHGSNGRNSQKWNRDSRYRIYEAGSDEDRHRKRHHSSQRKGSRHRSRDNSNVADESESDK
DRGHEKYSDVDWDTMSRDNEKQHDSKGKNSQKRNGDSKYQIDEAGSDEDRHRKKHLSSQM
KESRHQSSDSGYGIDESDKDKGEMEAQHGYSRKSSRHKRSGLQY
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgtggtcgaatcgaaaggagaagaggaaggcattgaagaaattgaagagaaaggagaga
aggaaagagattgctgagaaggaacgtttggaggaagaagctcgattgaatgatcctgaa
gaggagagaaagaggatactcttggagcagcaagaggcggagagaatcgaaagggataga
atcgctttcgaagagagggagaaagcttggattatcaaacaacaacaacaacgagaccta
gaagaagaacaacaacaactatctcaacgagacctagaacaacatgaatcagaattagaa
gaagaagaagaagaagacgttgatgatgacgacgatggtcgtccggagattatttggcta
ggaaatgaaattatcatacaaaagaagaaccccaatcccctccttctcctccacaaccac
aaccaccaccaccaccaccaccaccaccaggagcagcatgagcatcatgataatagacct
acatccaatccctttcccccggaatctccctctcaacctctgcacaatgttgctcaacaa
ccacctaatttcggaactgaactggataaagctcactgtccctttcatcttaaaactgca
gcatgtcgatttggtgaccgatgtagcagggtccatttctaccccgataagtcctgcacc
cttctcatcaaaaacatgtacaatggtcctggacttgcttgggaacaagatgaaggcctt
gagtatacagatgaggaggttgaacgctgttttgaagagttttatgaagatgttcacaca
gagttcctgaagtttggtgaaattgtgaacttcaaggtgtgtaaaaatggttcatttcat
ttgcgaggaaatgtctacgtacagtataagttgttggattctgctctgcttgcttataac
tcagttaatggtcgctacttcgctggtaaacaggtgagctgtaaatttgttaatttaaca
agatggaaggttgccatttgtggcgagtatatgaaatcaggttacaagacttgttcccat
ggaacagcttgcaattttatccactgtttccgtaatcctggcggagactatgaatgggca
gattctgacaaaccacccccgaaattttgggtaaaggagatggttgctttatttggtcat
tctgataattgtgagatgtcaagggtccatggaaattttagtgcgctgaagcactccagc
aatatcctagaaacagattctgacaggtatcactcaagaagatcaagatctagggagatg
ggtcaattatatggtggtcgttctagtagaagaagacaggaagatgaaagaaagcagaga
actcttgatgaggaatggaataccaactataaagacaatcataaaagaaaatacaggaac
aaaacttctgattctgattctgacaaggaagggttagaagaggtagataggaaaaagtat
catgaacacactaggaaaagctcatttaattggaacaaggatgacaatagcagaaggcat
gaagagtattctgatgtggatagggttactataaacagggacaatgaaaagccacatgat
agaaaaggaaggaactcgcaaaagtcgaaccgggatagtagggactggatttatgaggct
ggatgtgatgaggatagagatggagatggaagaaaacaccatattagccgaaggaaagga
tcaagacatcagagcagggacaacagtaatgtaactgatgaatctgaatctgacaaagat
agaggccatgaagagtattctgatgtggattgggatactatgagtagagagaatgaaaag
cagcatggcagtaatggaaggaactcacaaaagtggaacagggatagtaggtaccggatt
tatgaggctggatcagatgaggatagacatagaaaaaggcaccatagtagccaaaggaaa
ggatcgagacatcggagcagggacaacagtaatgtagccgatgagtctgaatctgacaaa
gatagaggacatgaaaagtattctgatgtggattgggatactatgagtagggacaatgaa
aagcagcatgacagcaaaggaaagaactcacaaaagaggaatggagatagtaagtaccag
attgatgaggctggatcagatgaggatagacatagaaaaaagcaccttagtagccaaatg
aaagaatctagacatcagagtagtgacagcggttatggaattgatgaatctgacaaagat
aaaggagagatggaagcacaacatggttactctaggaaaagctcgagacacaaaagatct
ggtcttcaatactaa

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