Medicago truncatula (barrel medic): 11421264
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Entry
11421264 CDS
T01716
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11421264
03036 Chromosome and associated proteins [BR:
mtr03036
]
11421264
Transcription factors [BR:
mtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
11421264
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
11421264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
CHDNT
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
11421264
NCBI-ProteinID:
XP_003616631
UniProt:
G7KH07
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Position
5:complement(36695405..36700932)
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AA seq
648 aa
AA seq
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MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKSDIVSVTWMKVPKSN
QLGVQIKDGLFYKFTGFRDQDVVSLTSFFQNTFGITVKEKQLSVSGRNWGEVDLNGNMLA
FMVGSKQAFEVPLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENCPPAQVFRDKIISVADVGAGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVESELALS
EDLYNSKFKDRLELSYKGLIHEVFTTVLRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
ILYPLEKSFFFLPKPPTLITHEEIDYVEFERHAAGGSNMHYFDLLIRLKSDQEHLFRNIQ
RNEYHNLYGFISSKGLKIMNLGDAQPTTGVAKVLEGDDDDAVDPHLERIRNEAGEDESDE
EDEDFVAEKDDEGSPTDDSGADDSDASQSGDEKEIPAKKEPKKDLSSKASASTSTSTSKK
KSKDADEDGKKKKQKKKKDPNAPKRGMSGFMFFSQMERENIKKANPGISFTDVAKLLGEN
WKKMSAEEKEPYEAKARVDKKRYEDEKIVYNAQPQPMNIDSGNESDSA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggtcatctcttcaacaatatcaccctcggcggccgtggcggcactaatccg
gggcagataaaaatatattctgggggaattttatggaagagacaggggggtggtaaatca
attgaagttgacaaatcagacatagtgagcgtgacatggatgaaggttccaaagagtaat
caacttggtgttcagatcaaagatgggttgttctacaaattcactggatttcgtgatcag
gatgttgtaagtttgaccagttttttccaaaacacctttggaataactgtaaaggagaag
caactttctgttagtgggcgcaattggggagaagttgatttaaatggaaatatgctggct
ttcatggttggctcaaagcaagctttcgaagtgcctttagcagacgtctcacaaactaac
cttcaagggaaaaatgatgtgatcttggagttccatgtggatgatacaaccggagccaat
gagaaagattcgttgatggagataagtttccatataccgaattccaacacccagtttgtt
ggtgatgaaaattgcccccctgctcaggttttccgtgataaaataatatctgtggccgac
gttggtgctggaggtgaagatgctgttgttacctttgatggtattgcaatccttacacca
aggggaagatatagtgtcgagttacacctgtcattcttgcggcttcaaggacaggctaat
gatttcaaaatccagtatagcagtgtagttcgactatttttacttcctaagtctaatcag
ccacataccttcgtcgttattagtctcgacccccctattcgaaaaggacaaactttgtac
cctcatattgtgatgcagttcgaaactgattatgtggttgaaagtgaattggcattaagt
gaagatctgtataactctaagttcaaagacagattggagttgtcgtataaggggcttatc
catgaagtgttcaccacagtattacgtggcttgtctggggccaaagttactaagcctgga
aaatttaggagttgtcaagatggttatgcagtgaaatcatctctgaaagctgaagatgga
attttgtatccccttgagaagagcttcttctttctacctaaacctcccactcttattact
catgaagagattgactatgtggagtttgagcgacatgctgctggtgggtcaaatatgcat
tattttgaccttcttatcagactaaaatctgaccaagagcacctctttcgtaatattcag
agaaacgagtaccacaatttgtatggttttatcagttcaaagggcttgaaaattatgaat
ttaggagatgcccaaccaactactggtgtggctaaggttcttgagggtgatgatgatgat
gctgttgatccacatcttgagcgcatcagaaatgaagctggtgaagatgaaagtgacgag
gaggatgaagactttgttgccgaaaaggacgatgaagggtctcctactgatgattctggg
gcagatgattctgatgctagccaaagtggtgatgagaaagagatacctgccaaaaaggaa
ccaaagaaggatctgtcttctaaggcatctgcttctacttctacttctacttctaagaag
aaatcaaaagatgcagatgaagatggcaaaaagaaaaaacagaagaagaaaaaggatcca
aatgcacccaagaggggaatgtctggattcatgttcttttctcaaatggaaagagagaat
ataaagaaagctaatcctgggatttcatttacggatgtggcaaagttacttggagaaaac
tggaaaaaaatgtcagctgaggagaaggagccatacgaggcaaaagctcgtgttgataaa
aaacgttatgaggatgagaagattgtctacaatgctcaaccacaaccgatgaatattgat
tcaggaaatgaatctgacagtgcctaa
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