KEGG   Medicago truncatula (barrel medic): 11421539
Entry
11421539          CDS       T01716                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03013  Nucleocytoplasmic transport
mtr03015  mRNA surveillance pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11421539
  09122 Translation
   03013 Nucleocytoplasmic transport
    11421539
   03015 mRNA surveillance pathway
    11421539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11421539
   03041 Spliceosome [BR:mtr03041]
    11421539
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     11421539
Spliceosome [BR:mtr03041]
 Complex C
  Other components
   EJC/TREX
    11421539
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 11421539
NCBI-ProteinID: XP_003604064
UniProt: G7J8K6 B7FMU3
LinkDB
Position
3:58696270..58697776
AA seq 151 aa
MGSEEENAEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPA
VLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSAD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 456 nt   +upstreamnt  +downstreamnt
atgggaagcgaagaagagaatgcagagttctacttgagatactacgttggtcataagggt
aaattcggacatgaatttttggagtttgagttccgtccagatggtaagcttcgttatgct
aacaattccaattacaaaaacgatacaatcattcgtaaggaggtttatcttactcctgct
gttcttcgtgagtgtcgtcgtatcatttctgacagcgagattatgaaggaagatgataac
aactggccagaaccagaccgtgttggtcgtcaggaacttgagattgtgatggggaatgag
catatctcctttactacttccaagattggttctcttgttgatgttcaaagcagtgctgat
cctgaaggccttcgcatcttttactatcttgttcaggatttgaagtgctttgtcttctct
cttatttcacttcacttcaagatcaagcctatataa

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