Medicago truncatula (barrel medic): 11421539
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Entry
11421539 CDS
T01716
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
mtr03015
mRNA surveillance pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11421539
09122 Translation
03013 Nucleocytoplasmic transport
11421539
03015 mRNA surveillance pathway
11421539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11421539
03041 Spliceosome [BR:
mtr03041
]
11421539
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
11421539
Spliceosome [BR:
mtr03041
]
Complex C
Other components
EJC/TREX
11421539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
11421539
NCBI-ProteinID:
XP_003604064
UniProt:
G7J8K6
B7FMU3
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All DBs
Position
3:58696270..58697776
Genome browser
AA seq
151 aa
AA seq
DB search
MGSEEENAEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPA
VLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSAD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgaagaagagaatgcagagttctacttgagatactacgttggtcataagggt
aaattcggacatgaatttttggagtttgagttccgtccagatggtaagcttcgttatgct
aacaattccaattacaaaaacgatacaatcattcgtaaggaggtttatcttactcctgct
gttcttcgtgagtgtcgtcgtatcatttctgacagcgagattatgaaggaagatgataac
aactggccagaaccagaccgtgttggtcgtcaggaacttgagattgtgatggggaatgag
catatctcctttactacttccaagattggttctcttgttgatgttcaaagcagtgctgat
cctgaaggccttcgcatcttttactatcttgttcaggatttgaagtgctttgtcttctct
cttatttcacttcacttcaagatcaagcctatataa
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