Medicago truncatula (barrel medic): 11421788
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Entry
11421788 CDS
T01716
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00906
Carotenoid biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
11421788
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mtr01006
]
11421788
Enzymes [BR:
mtr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
11421788
Prenyltransferases [BR:
mtr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
11421788
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
11421788
NCBI-ProteinID:
XP_003616147
UniProt:
G7KFR8
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All DBs
Position
5:complement(33987574..33992137)
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AA seq
434 aa
AA seq
DB search
MSVTLLRVASSPSLEVSCSNGLLDSFGVVKLVDSSKFLSRDFVSIRAKKNDKKKTRRFCS
LSTDIKYACVGQPGLESASNFPLLSNVLANPTAGEVTVSSEQKVYDVVLKQASLVKRKLS
STGELEVKPEIVLPGNLSLLSEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAIYVWC
RRTDELVDGPNASHITATAMDRWESRLDELFQGRPFDMLDAALSDTVNRFPVDIQPFKDM
IEGMRMDLKKSRYKSFDELYLYCYYVAGTVGLMSVPVMGISTHSQATTESVYNAALALGI
ANQLTNILRDVGEDARRGRVYLPQDELTLAGLSDDDIFAGKVTDKWRNFMKSQIKRARTF
FDEAEKGVTELNEQSRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKTKKLLSLPLAY
ARSMVPPSKKLSHV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgacattattaagggttgcttcctctcctagcttagaggtctcctgttccaat
ggtttactcgattctttcggggttgtgaagcttgtagattcttcgaagttcttgtctaga
gactttgtgtcaataagagcaaaaaagaatgataagaaaaagacacggagattttgctca
ttgagtacagatattaagtatgcatgtgttggtcagcctggcttagagagtgctagtaac
ttccctttgttatcgaatgtgctcgcaaacccgactgcaggagaagtgactgtttcgtct
gagcagaaggtatatgatgtggttctgaagcaggcgtctttggttaagaggaagctgagc
tctaccggtgaacttgaagtgaaaccggaaattgttttgcctgggaatttgagtttgttg
agtgaagcatatgatagatgtggagaaatttgtgcagaatatgctaaaacattttacttg
ggaactcttctaatgactcctgaaaggcgaagagctatttgggcgatatatgtttggtgt
aggaggacggatgaacttgtcgatggccctaatgcttcacatattacagcaactgcaatg
gataggtgggaatcaagattggacgaacttttccaagggcgtccatttgatatgcttgat
gctgctttatcagataccgtcaacagatttcctgtcgatatccagccatttaaagatatg
atagaaggaatgagaatggatcttaagaagtcaagatacaaaagctttgatgaactatat
ctctactgttactatgttgctggaactgttggtttaatgagtgttccggtcatgggcatt
tcaacacattcgcaagccacaacagagagtgtatacaatgctgccttggccttgggaatt
gcaaatcagcttaccaacatactcagagatgttggagaggatgccaggcgaggaagagtg
tatctaccacaagatgaattgactttggcagggctttcagatgacgacatatttgccggt
aaggtgacggacaagtggaggaacttcatgaagagccaaattaaaagggcgagaacgttt
tttgatgaggcagaaaagggagtgacagagcttaatgaacagagcagatggccggtgtgg
gcgtctttgctattgtatcgacaaatattggacgaaatagaagctaatgattacaacaat
ttcactaagagggcttatgtgagcaaaacaaagaagttactttctttaccacttgcatat
gctagatctatggttcctccatcaaaaaagttatctcatgtatag
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