Medicago truncatula (barrel medic): 11422040
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Entry
11422040 CDS
T01716
Name
(RefSeq) exopolygalacturonase clone GBGE184
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Module
mtr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11422040
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
11422040
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
11422040
NCBI-ProteinID:
XP_039685828
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Position
1:complement(43196142..43197951)
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AA seq
407 aa
AA seq
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MATTTNFFILGILFISVIGASGRSLLDNGSAGGIYDVTKFGAVADGKTDNVEKIRAAWQA
ACKTSTVPATVLIPAGTFVTGQTLFAGPCTSPKPITVEIVGKAQATTDLSEYYSPEWFQF
ENIDGLVLKGSGVFDGQGSISWPLNDCKQNKGNCASLPSSLKFDKIKNAIVQDVTSLNSM
QFHFHLHGCSNISFTNLHITAPGNSPNTDGMHISSSDFITVTNSVIATGDDCISVGHSTS
NITISGITCGPGHGISVGSLGKRPEEKTVNGVSVKNCTFIGSTNGARIKTWIGTAPAEAK
NIVYEDLIMKDVQNPIVIDQSYGKKERVPSTSVWKISDAHFRRIKGTTVSNIPVSLQCSS
KNPCENIEVADVELTYVGPQKSIPFANSCINAKAIFGGKLNPAACVS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctacgacaacaaacttttttatcttaggcattcttttcattagcgtgataggtgca
tcgggtcgtagcctccttgataatggtagtgcaggaggaatttatgatgtcacaaaattc
ggtgctgttgctgatggaaaaaccgacaatgttgaaaaaattagggctgcatggcaggca
gcatgcaaaaccagtaccgtaccagcaacagttttgattccagcgggaacgttcgtcact
gggcaaactctttttgcagggccatgcacaagtccaaagcccataactgttgaaattgta
ggaaaagctcaagccacaacagatttatctgagtattatagtccagaatggttccaattt
gaaaacattgatggcttggtgttgaaaggcagtggagtttttgatggccaaggaagcatt
agttggccgttgaatgattgcaagcagaacaagggaaattgtgcttccctcccttcttct
ttgaaattcgataagattaaaaatgcaatcgtgcaagacgtgacatcattgaacagcatg
cagttccacttccatctacatggttgcagcaacatttcatttactaacctccacataaca
gctccaggaaacagtccaaacaccgatggcatgcacattagctccagcgacttcattact
gtcactaacagcgtcatcgcaacaggtgatgattgtatttctgttggacatagcacatcc
aacatcactattagtggcattacatgtggtcctggtcacggtattagtgttggaagtctt
ggtaagaggccagaggaaaaaactgtgaatggtgtttcagtcaaaaattgcacgttcata
ggctcaaccaatggtgctagaattaaaacctggattggaacagcaccggctgaggcaaaa
aacattgtttatgaagacttgatcatgaaggatgtccagaatcccattgttattgaccag
agttatggcaaaaaagagagagtgccttcaacttcggtgtggaagatcagtgatgctcat
ttccgtaggataaaaggaacaacagtctcaaacattccggtgtcattgcaatgcagctca
aagaatccatgtgaaaatattgaggtagcagatgttgaattgacttatgtaggtcctcaa
aaaagtataccttttgcaaactcttgtatcaatgcaaaagctatttttggagggaaactc
aacccagcagcttgtgtatcataa
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