Medicago truncatula (barrel medic): 11422191
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Entry
11422191 CDS
T01716
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11422191
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
11422191
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
DUF685
THOC7
Drf_FH3
Motif
Other DBs
NCBI-GeneID:
11422191
NCBI-ProteinID:
XP_003602012
UniProt:
G7J4E0
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Position
3:43256393..43260640
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AA seq
533 aa
AA seq
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MSTKNQFKEAILADKLAKLNSTQQCIETLSHWCIFHRSNAEQVVATWKNQFDKSDMIHRI
PLLWLANDILQNSKRNGKEFVIEFWKVLPAALKDVIAKDDDRGKRAVSRLFEVWEQRNVF
GSRVPNLKDAMLGEGSPPPLEFGKKRPRSARIMKRDSVKILKRDSRSIKSKLSIGGTTEK
IVSAFHLVLGEQANEDAEMSKCKSAVQRVRKIEKDVDIACATAKDPTRKTLRKELEEQQS
LLKHCIEKLKLVEENRVALVSQLKEALHEQESDLENVRTQMQVAQAQIEEASNMQKRLDN
EDSSQNASIKTSQSEAATKKSAAAIAAEVADKLTASSSSQLIMSSVLSTFAAEEAKSVGL
TSESTSKPMISMPSSDAHVYMSGQQMTAVPNHSYPSVLVTQPTMHNAAPALQGQYPLYCN
PSSQQYVQSNGGQYVQSTGGVISPYGYGSIPPLQPVPPPPPFANQTPQITQQQPLPTFTN
QTLHITQQQPLPTFTNQTLQITQQQPVPLTQYAPAPPSFRPLQPSGMMYYGNH
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaaaaatcagttcaaggaggcgatacttgcggataaacttgccaagcttaat
agtactcagcagtgcattgaaactttatcacattggtgtatatttcaccggagcaatgca
gaacaagttgttgcaacatggaaaaatcaatttgacaaatcagatatgattcacagaatc
ccccttttgtggcttgcaaatgacatcctgcagaacagcaagcgtaacggaaaggaattt
gtgattgaattctggaaggttcttcctgcagcacttaaagatgttattgcgaaagatgat
gatcgtggaaagcgtgcagtatctagactgtttgaagtatgggagcaaaggaatgtgttt
gggtctcgagtaccaaaccttaaggatgcaatgcttggagagggttctcctccgccattg
gaattcggcaaaaaaagaccacgttctgcacgaattatgaaaagggattctgtaaaaatt
ttgaaaagggattctcgctctatcaaatcgaaattgtccattggaggaacaacagaaaaa
atagtgtctgcatttcatttggtgctcggtgaacaagccaatgaagatgcagagatgagt
aaatgcaagtctgctgttcagcgtgtaaggaagatagagaaagatgttgatattgcatgt
gccactgccaaggatcctacgcgaaaaactttgagaaaggagctcgaggagcaacaaagt
ctattgaaacattgcatagaaaaacttaaattagttgaagaaaatagagtagccctagta
tctcagttaaaagaagctttgcatgaacaggaatcggatctggagaatgttcgtacgcag
atgcaggttgcacaagcacaaatagaagaggctagcaacatgcaaaagcgacttgataac
gaagattcttcacagaatgcatcaattaaaacttctcaatcagaagcagcaactaaaaag
tcagctgcagcaattgccgctgaggttgcagataagcttacagcttcatcgtcatctcaa
ttgatcatgagttctgttctctcaacatttgccgcagaagaggcaaagagtgttggtcta
acgtccgagtccacatcaaaacctatgatatcaatgccaagttcagatgctcatgtctac
atgtcaggacaacagatgactgctgtaccaaaccattcatatccttcagttttggtaact
caaccaactatgcacaatgcagcccctgcgttgcaaggtcaatatcccttatattgcaat
ccgtcgtcccagcagtatgtgcagtcaaatggagggcaatatgtgcagtcaactggaggg
gtcatctctccatatggttatggcagcatcccacctttacagccagttccaccaccacca
ccttttgctaatcagacaccacaaataacacagcaacaaccactaccaacttttacgaac
cagacactgcacataacacagcaacaaccactaccaacttttacaaatcagacgctgcaa
ataacacagcaacaaccagtaccattaacacaatacgctccagcacctcctagtttccgg
cctcttcagccatcaggaatgatgtactatggtaatcattga
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