Medicago truncatula (barrel medic): 11422260
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Entry
11422260 CDS
T01716
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11422260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11422260
Enzymes [BR:
mtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
11422260
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
11422260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
11422260
NCBI-ProteinID:
XP_003620365
UniProt:
G7KM62
LinkDB
All DBs
Position
6:37991921..37998521
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AA seq
752 aa
AA seq
DB search
MGIPGMNNQSNGKQWLGITEPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEV
LGRLDQIVKIWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
TRDEDFFGELQKMLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLD
ISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGF
LGGINLALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPR
RNPRDRYHLMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFE
PYPFFEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFS
DKSRSFHQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKR
RNIPNFIFPGGVRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGKAVVLGADDERKRKRL
EDNNNSRVSKSSASVSPPNRNVPEDRNPFSATSSCSMKFDDSEVNSMGDQKSEKLCLKSV
GEIPAGDSVTNGSATDNKQLDAPDTSNTKEEERLAIEHIMAGPYEAHQALTEEPDELEQD
MGYRNQVNDNGGSVKSNNFDSSNPNPVVVEDQVISKETVCSTHSFCNGGLEELEPAELTA
PLFCGIPAPVPQKKPLIRLNFTSLGKAVNKST
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctggaatgaacaatcagagtaatggaaaacaatggttagggataactgag
ccaatttcattggctggaccaactgaggaagatgtgacaaagactcatgaacttgaaaag
tacttgcaaggcgctggattgtatgagagtcagcaggaggcagttggtagggaggaagtg
cttggcagactggaccagattgtgaagatttgggtgaaaaccattagcagggcgaaggga
ttcaatgaacaactggtgcaagaagcaaatgccaaaattttcacttttggctcctatcgg
ctaggggtgcatggtcctggagcggatatagataccctttgtgtaggacctagacatgca
accagagatgaagatttctttggtgagctacagaagatgctatctgagatggaggaagta
actgaattgcaccctgtgcctgatgctcatgtccctgtgatgaaattcaagtttaatgga
gtttctgtagatctcctgtatgcaagattggcattgtgggttattcctgaagacttagat
atatcacaggaatcaatattacaaaatgtagatgaacaaactgttctcagtctcaacgga
tgtagagtaactgatcaagtcttgcgtttagttccaaatattcagaattttcgcacaaca
ttgaggttcatgaggttttgggcaaagcgtcgtggtgtttattcaaatgttgctggtttt
cttggtggtataaatctggcattgcttgttggtcgaatatgccagctttatcctaacgca
cttccaaatatgttggtgtctcggttctttagagtatatactcagtggcgatggccaaat
ccagtcatgctttgtgctattgaagaaggatctcttggactatcggtttgggatcctaga
agaaatccccgagatagatatcatctaatgccaataattactcctgcttatccttgcatg
aattctacttacaatgtgacaactagtacgctgcgtattatgtcagacgagttcaagagg
ggaactgaaatatgcgaggctatggaggctagcaaagctgattgggatactctttttgag
ccgtacccattttttgaagcttacaagaattacctacaaatagacataacagcagagaat
ccagacgaccttagacaatggaaaggttgggttgagtctcgtctccgccagttgacattg
aagattgagaagtacacttatggtatgcttcagtgtcacccgtatcctggcgaattttca
gacaaatctagatccttccaccaatgttactttatgggtctgcagcgtaagcaaggtgtt
ccggtaagcgaaggtgaacagtttgatataaggcaaactgtagaagaattcaagcataat
gtaaacgcttacactgcatggaaacctggaatggacatccgcgtctcccatgtgaaacgt
cgtaacataccaaacttcatatttcctggcggtgttcgaccttccgtcccgtctagagta
aacggtgagaatagacgaagttcgaaatcaagggttgctggtcaaagtcaatctgaaaag
tctcaaggaggtaaagcggttgtacttggagccgatgatgaaaggaagagaaagcgattg
gaggataataataactcaagggtttcaaagtcctctgcatctgtatcccctcccaatagg
aatgttcctgaagatagaaatccttttagtgctactagttcttgttctatgaaatttgat
gactctgaagtcaatagtatgggtgatcaaaagagcgagaaactctgtctgaaatcggtt
ggtgagattcctgctggtgatagtgtaaccaatggatcagcgacggataacaaacaactt
gatgctcctgatacatctaacactaaagaagaagaacgtctagccatcgagcatattatg
gctggtccgtatgaagcgcatcaagctttgacagaagaacctgatgagcttgaacaagat
atggggtatagaaatcaagtcaatgataatggtggaagtgtgaaaagcaacaattttgac
tcttcaaatccaaatcctgtggtagtggaagatcaagttatttcaaaggaaaccgtatgt
tcaactcattcattctgtaatggaggcttggaggagcttgagcctgctgagctgacagca
ccattgttttgtgggattcctgctcctgtaccacagaagaagcctcttatcaggttgaac
ttcacttccttggggaaagcagtgaataaaagcacgtaa
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