Medicago truncatula (barrel medic): 11423253
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Entry
11423253 CDS
T01716
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11423253
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
11423253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_EZ
TPR_Trm732_C
HEAT_ECM29
HEAT_2
HEAT_GCN1_C
HEAT_GCN1
ARM_TBCD_2nd
mTOR_dom
UTP20
Motif
Other DBs
NCBI-GeneID:
11423253
NCBI-ProteinID:
XP_024637942
LinkDB
All DBs
Position
4:12753231..12777745
Genome browser
AA seq
2045 aa
AA seq
DB search
MAQQSSRLQRLLTLLDTGSTQATRLTAARQIGEIAKSHPQDLTSLLKKVSQYLRSKKWDT
RVAAAHAIGSIADNVKHISLNELIASVVTKMSESGISCSVDDLCAWPYLQAKITGSSFRS
FDMNKVLEFGALLASGGQEYDIASDNIKNPKERLVRQKQNLRRRLGLDVCEQFMDINDVI
RDEDLMAYKSDSYLNGIDHKVFTSCSVHNIQKMVANMVPSVKSKWPSARERNLLKRKAKI
NSKDQTKSWCEDGTEPSGTQNLTSKGTCPDSGNYSKASEQVNHEEDGFEHDGDGQWPFST
FVEQLIIDMFDPVWEVRHGSVMALREILTHQGASAGVFKQESRLGGTSFVELEDKNISNT
LKRERDIDLNMQVSADESVLNLKRPKLEDVSSTTSMDSVMTCSNDGDIENSISSEIQGCN
LPLDYENGKFDGSSVDMNLKTHSDGLHDACKDSANITEQKGYSDDKMITGNPNVLRNLPQ
NCELMNLVKVARSSWLRNCEFLHDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGA
AFKYMHAALVNETLNILLKMQCSPEWEIRHGSLLGIKYLVAVRQEMLSDLLGRVLPACKS
GLEDPDDDVRAVAADALIPAAAAIVALQGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLL
AEIYSHQEMVPKMYKVFKMGDKEIENGAGGCGDDGEEHPFVLSTLAPRLWPFMRHSITSV
RYSAIRTLERLLEAGYKRSMSEPSPASFWPSSIFGDTLRIVFQNLLLETNEDILQCSERV
WSLLVQCSVVDLENAASSYMTSWIELASTPFGSALDASKMFWPVAFPRKSQFRAAAKMRA
VKIENEYGGDLGLESMKSTIPQDRNGDVPLNSIKIVVGAEVDISVTRTRVVTATALGTFA
SKLPEGSLKYVIDPLWSSLTSLSGVQRQVASLVLISWFKENRTRSLSENLNVIPACLKDW
LLDLLACSDSAFPTKGSLLPYAELSRTYSKMRSEAAQLLNAVKSSGMFSELLTTTNIELD
NLSVDDAIGFASKIPAVCNDSTANESIKNTMDDIESSKQRLLTTSGYLKCVQNNLHVTVT
SAVAAAVVWMSEFPTRLNPIILPLMASIRREQEEILQIKSAEALAELIYHCVSRRPCPND
KLIRNICGLTCMDPSETPQAKSICSIESIDDQGLLSFRTPVNKQKSKVHVLTGEDRSKVE
GFISRRGSEQSLRLLCEKFGVLLFDKLPKLWDCLTEVLKPSSSESLLAANEEEDTVAIES
VSDPQTLINNIQVVRSIAPLLNEELKPKLLTLLPSVFKCVKHSHVAVRLAASRCITSMAQ
SMIVKVMGAVVENAIPMLEDASSVHARQGAGMLISFLVQGLGVELVPYAPLLVVPLLRCM
SDCDQSVRQSVTHSFAALVPLLPLARGVPQPIGLGEGVSRNAEDLHFLEQLLDNSHIEDY
KLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASEIVERRTQI
GNEDLLPSLIICPSTLVGHWAFEIEKFIDVSVISSLQYVGSAQDRMLLRDSFCKHNVIIT
SYDVVRKDIDYLGQLPWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIM
DLWSLFDFLMPGFLGTDRQFQSTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLL
RRTKDEVLSDLPEKIIQDRYCDLSTVQLKLYEQFSGSRAKQEVSSIVTTNESAAGEGSGS
STKASSHVFQALQYLLKLCSHPLLVLGGKIPDSLSTILLELFPAGSDVISELHKLHHSPK
LVALHEILEECGIGVDASSTENAVGIGQHRVLIFAQHKAFLDIIEKDLFQTHMKSVTYLR
LDGSVETEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDLQA
MDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASLKTMNTDQLLD
LFASAEIPKGSSVAKSSEDNSDGDPKLLGSGKGMKAILGGLEDLWDQSQYTEEYNLSQFL
AKLNG
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atggcccaacagtcatccaggcttcagcgcttgcttactctcttggacactggctcaacc
caagcaacaaggttgactgcagctcggcagatcggggagattgcaaaatcgcaccctcaa
gatttgactagtcttcttaagaaggtttctcaatatctgcgaagtaaaaaatgggataca
agagttgcagctgctcatgcaattgggtctattgccgataatgttaagcacataagcttg
aatgaacttattgcttctgttgtaacaaaaatgtctgagagtgggatatcttgtagtgtt
gatgatctgtgtgcatggccttatttacaagcaaaaattacaggaagctcatttagaagc
tttgatatgaataaggtgcttgaatttggagctttattagcatcaggaggacaggaatat
gatattgcaagtgataatataaagaacccgaaggagcgattggttcgccagaagcaaaat
cttcgacgtcggttaggtttggatgtgtgcgaacaatttatggatatcaatgatgtaata
agagatgaagatctcatggcatacaaatcagattcatatctcaatggcatagatcataaa
gtttttacatcttgttctgtacataacatccagaaaatggttgcaaatatggttcctagt
gtcaaatcaaagtggccgagtgctagagaacggaatcttttaaaacgcaaagcaaaaatt
aactctaaagaccaaacaaagagctggtgcgaggatggaacagagccttcaggtactcaa
aatttgacctcaaaaggcacatgtcctgattcaggaaattatagtaaggcatccgaacaa
gttaatcacgaggaagatgggtttgagcatgatggagatggacaatggcctttcagtact
tttgttgagcaacttattattgatatgtttgatcctgtttgggaggttcggcatggtagc
gtgatggcattgagggagattttaacacaccaaggtgcttcagctggagtgtttaaacag
gaatcacgcttgggtgggacatcgtttgtggagttagaagacaaaaatatatcaaatacg
ttgaagagagagagggacattgatttaaatatgcaagtttcagcagatgagtctgtcttg
aacttgaagagaccaaaacttgaagacgtatcatcgacaacttctatggatagtgtgatg
acttgcagcaatgatggtgatattgaaaacagcattagttctgaaatccagggatgcaat
ttacctctggattatgagaatgggaaatttgacggtagttctgttgatatgaatctgaaa
actcactctgacggtttacatgatgcatgcaaggactctgctaatattacagagcagaag
ggttattctgatgacaaaatgattactggaaaccctaatgtgctgagaaatcttcctcag
aattgtgagctgatgaatttggttaaagtggctagaagttcctggcttcgaaactgtgaa
tttcttcacgactgtgtcatacgctttttgtgtgtattgtcacttgaccgctttggagat
tatgtatctgatcaggttgttgctccagtgcgtgaaacttgtgcacaggcattaggtgct
gcatttaagtatatgcatgctgcactagtaaatgaaacattgaacatattgttgaaaatg
cagtgtagtccagaatgggagattcgtcatggcagtcttctgggtatcaaatatttggtt
gctgtgcgacaggagatgctttccgatttgcttggacgtgttcttcctgcttgtaaatct
ggcttggaggacccagatgatgatgtccgagctgttgccgctgatgctttaataccagct
gcagcagcaattgttgctttgcagggtcaaactttgcattcaattgtgatgctgttgtgg
gatatattgcttgacttggatgatttaagtccatccactagcagtgtaatgaatctgctt
gcagaaatctattcccatcaagagatggtcccaaaaatgtataaagtttttaaaatgggc
gacaaggaaatagaaaatggtgctggtggttgtggagatgatggagaagaacatcctttt
gtactttcaactttggcaccacgtttgtggccctttatgaggcacagcatcacatctgtc
cgttattcagcaatacgaactctggaaaggctgcttgaagctggatataagagaagcatg
tctgagccatcccctgcgtctttttggccctcttctatatttggagatacccttagaatt
gtttttcagaatttactattggaaacgaatgaggatattttgcaatgttctgagagagtt
tggagtctccttgttcagtgttctgtcgtggacctggagaatgctgcaagctcttacatg
acttcctggatagaacttgcatctacaccttttggttctgcattagatgcctcaaagatg
ttttggcctgttgcctttcctcgaaaaagtcaatttagagcagcagctaaaatgagagct
gtgaagattgaaaatgaatatggcggagatcttggccttgaatctatgaaatcaactatt
ccacaagatagaaatggagatgttcctttgaattccattaagatagttgttggtgctgag
gtcgacatatcagtaactcgtacccgggtagttacagcaactgctttgggaacttttgcc
tctaagcttccagagggttctttgaagtatgtaattgatccactatggagttcattaacc
tctctgtctggtgtccagcgccaggttgcatctttggtacttatttcttggttcaaggag
aataggaccaggagtttgtctgaaaacctcaatgttattcctgcttgcctcaaagattgg
ttgctggacttgttagcatgttctgactctgcattcccaacaaaaggttcacttcttcct
tatgcggagctttcaagaacttattcaaagatgcgaagtgaggctgctcaattgctaaat
gcagtcaagtcttctggtatgtttagcgagctattgacaacaaccaatattgagttggat
aacttgagtgtagatgatgccattggttttgcatcaaaaattccagcagtgtgtaatgat
agtactgcaaacgaatctataaagaacactatggatgatattgaatcgtcaaaacagagg
ctcttgacaacttctggttatttgaaatgtgttcagaataatttacatgttacggttaca
tctgcagttgcagctgcagttgtgtggatgtctgagtttcctacacgactcaatcccatc
attttgcctttaatggcttcaatcagacgagagcaggaggaaatactgcaaattaagtca
gctgaggctctcgctgagctaatatatcactgtgtttcacgtagaccttgccccaatgat
aaattaattaggaatatatgtggtttgacttgcatggatccttctgagacccctcaagct
aaatccatttgttccatcgagagtattgatgaccaaggtcttctgtctttcagaactccg
gtgaataaacaaaagtcaaaggtacatgtgctgactggtgaggatcgatcaaaggtggag
ggatttattagtagacgtggatctgagcaatcattaaggcttctgtgtgagaagtttggt
gttttgctatttgataaacttcctaagctgtgggattgtcttaccgaggttcttaagcca
agttcctctgaatctctacttgctgctaatgaagaggaagatactgtagcaattgagtct
gttagtgatcctcagaccttgattaacaatattcaggttgtgcggtctattgcccccttg
ttaaatgaggagctgaagccaaaacttttgacacttctcccatctgtttttaaatgtgtt
aagcattcacatgtcgctgttagactagctgcttcacgctgcatcacctccatggcccag
tcaatgattgtgaaagttatgggagccgtggttgaaaatgctatccctatgttggaagat
gcatcatcagttcatgctcggcaaggagcaggcatgttgattagctttcttgttcagggg
cttggtgtagagttggtcccatacgctcctctgctggtggttccccttctacgatgcatg
agtgattgtgatcagtctgtcagacagagtgttacccatagctttgctgctcttgtacct
ttacttcctttagcacgtggtgttccacaaccaattggattaggggaaggtgtatctaga
aatgcagaagatttacattttctggagcagctacttgacaactctcatattgaagattac
aagttgtgcactgaattgaaagtaacattgagaaggtatcaacaggaaggcataaattgg
ttagcttttctgaaacgtttcaaacttcatggaattttatgtgatgacatggggcttggt
aagacacttcaagcatcagcaattgtggcctctgaaatagttgagcgtcgaactcaaatc
ggaaatgaggatcttctgccatctttaattatttgcccgtcaacactagttgggcactgg
gcctttgagatagaaaagtttattgatgtttcagtcatatctagtcttcagtatgttggt
tctgctcaggatcgaatgcttcttcgagatagtttttgcaagcataatgtaattataaca
tcatatgatgttgtccggaaagatattgattatttgggacagctgccatggaattactgc
attttagatgaaggacatataataaaaaatgccaagtctaaagttactcttgctgtaaag
cagttgaaagcccaacaccgcttgatattgagtgggacaccaatacagaataacataatg
gacttgtggtccctttttgattttttgatgcctggatttctcggaacagatagacagttc
caaagcacatatggaaaaccacttttagcttcaagagatccaaagtgctctgctaaggat
gccgaagctggagcacttgctatggaagcattgcataagcaggtcatgcctttcctcctt
cggaggacgaaggatgaagtcttgtccgatctgccagagaaaataattcaagacagatac
tgtgatttgagcactgtacaacttaaactttacgaacagttttctggttctcgtgcaaaa
caagaggtgtcatctattgtaacaacaaatgagtcagctgcaggagaaggaagtggcagt
tctactaaagcgtcttcacatgttttccaggcactccaatacttgctaaaactctgtagt
catccgttgcttgtacttggtgggaagattccagattcactctctaccatccttttggaa
ctgtttcctgctggttctgatgtcatttcagaacttcacaaactccatcactctccaaaa
ctagttgctcttcatgagattctcgaagagtgtggaattggagttgatgcttcaagtact
gagaatgctgttggcattgggcagcatagggtcttgatatttgctcaacataaggcgttc
ttggatataattgaaaaagatttgtttcagactcacatgaaaagtgtcacatatttgcgg
ctggatggatcagttgagaccgagaagcgatttgaaattgtaaaagctttcaattcagat
cctaccattgatgtcttattgcttacgactcatgtgggcgggcttggtttgaacctgaca
tctgcagatacccttgtttttgtggagcatgactggaatcctatgcgtgatcttcaggct
atggatagagcgcacaggttaggtcagaaaaaagtagttaatgttcaccgtctgataatg
cgtggtactctggaagagaaagttatgagtctacaacggtttaaagtgtcagtggctaat
gctgtcattaatgcggaaaatgctagtttgaaaacaatgaatacagatcagttgcttgat
ttatttgcatcagcagaaatccccaaggggtcttctgttgcgaagagttcagaggacaac
agtgatggagaccctaaattattaggcagtggaaagggaatgaaagcaatacttggagga
ttggaggatctatgggaccaatcacagtatacagaggagtacaatttgagtcaatttttg
gcgaagcttaatggttaa
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integrated database retrieval system
