Medicago truncatula (barrel medic): 11423679
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Entry
11423679 CDS
T01716
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11423679
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
General mRNP proteins
11423679
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
11423679
NCBI-ProteinID:
XP_003602518
UniProt:
G7JAD6
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All DBs
Position
3:46975227..46983133
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AA seq
587 aa
AA seq
DB search
MDFDEYEYLEKTVEELEDKDSKKNESSDKTERSYRKRDEIEDGTEEKRSKRRSSGDGDDE
RVSKKDRDRDDDRDKERHRSGRDRDRDRDRDGERSSRDRDRDREKDRDREKDRREKEKER
ERREREREKERERERSRRSKSRSERDREIEREERERSRRSISRSERDREREREERDRSRR
SRSRSERDFEMRDSRRFREKKETVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK
VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN
TTTGAAGVVGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGF
GFIQFAHIEHAKAAQSLNGKLEIAGRTIKVSSVADHIGSQDTTTKSADFDDDEGGLALNA
QSRALLMQKLDRSGITASIGLPMNGLAPAQPAISLPIGNTGLIHPGLIPAPGLALPTQIM
PTQVAEPVGTPSNCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAG
FVYLMFETVEAASAAQRAMHMRWFARKMISAIYMQPHEYEAKFKGEL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgaatacttggagaagacagtggaagagctggaagacaaagac
tcgaagaagaatgaaagcagcgacaaaaccgaacggagctacagaaagcgcgatgagatt
gaagatggcaccgaagagaagaggagcaaaagaaggtccagcggcgacggcgatgacgag
cgtgtctcgaagaaggatagagatcgtgatgatgaccgtgacaaggagcgtcatcggagt
ggcagagatagagatagggatagggacagagatggcgagagaagcagcagagatagggat
agggatagggagaaggatagggacagagagaaagataggagagagaaggagaaagagagg
gaaaggagagagagggaaagggagaaggaaagggagagagaaaggtctcggaggagtaag
agtcgttctgagagagacagggagattgaaagagaggagagagagaggtctcggagaagc
ataagccgttctgaacgagacagggagagagaacgggaggagagagataggtctcggagg
agtagaagtcgttctgagcgcgattttgaaatgagagatagccggagatttagggagaag
aaagaaactgtcgagcctgaggcagatccagaaagggatcaaagaactgtttttgcctat
cagatgcccttaaaggcaacagaaagggatgtttatgaattcttctcaaaagctggcaag
gtgagagatgttcgtctgatcatggataggaactcaagacgatctaaaggagttgggtat
attgaattttatgatgcaatgtcggtgccaatggcaattgccctctctggccaacttctt
cttggacaacctgtaatggtaaaaccttctgaggctgaaaagaacctagttcaatctaat
actactaccggagctgctggtgtggtaggaccatatggagccgtggacagaaaactgtat
gtggggaaccttcacttcaatatgactgagagccagttgagagagatttttgagccattt
ggtactgtagaggttgtgcaactgccccttgacctggagaccggacattgcaagggtttt
gggtttattcaatttgcccatatagagcatgccaaggctgctcagagtttaaatggaaaa
ttggaaattgctggcagaactatcaaggtttcatctgtagcagaccatattggaagtcaa
gacacaacaacaaaatctgcagattttgatgatgatgaaggtggattggctttaaatgcc
caatcaagagcattgcttatgcagaagctggatcgctctggaattactgcaagcattggt
ttacccatgaatgggttggctcctgctcagccggctattagtttgcctattggtaatact
ggattaatacatcctggattaatacctgcacctggactagctctaccaactcaaattatg
cctacccaagtggccgaacctgtcggaacccccagcaactgtttgctgttgaagaatatg
tttgatccaaccactgagaccgaaccagattttgatctagacatcaaagaagatgtagaa
gaagagtgttctaaatatgggcgggtgaagcatatctatgttgacaaaaatagtgcaggt
tttgtgtatttgatgtttgaaacggtggaagcagcaagtgctgctcagcgtgcaatgcac
atgaggtggttcgcacgcaaaatgatttcagctatatacatgcaacctcatgagtatgaa
gccaagtttaaaggggaactttga
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