Medicago truncatula (barrel medic): 11423814
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Entry
11423814 CDS
T01716
Name
(RefSeq) vacuolar protein sorting-associated protein 35A isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
11423814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11423814
Membrane trafficking [BR:
mtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
11423814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
11423814
NCBI-ProteinID:
XP_003612215
UniProt:
G7JXK2
LinkDB
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Position
5:complement(8937805..8949687)
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AA seq
794 aa
AA seq
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MMIDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQNPVRGLFLRSYLSQVSKDKLPDIGSEYEGDADTVSDAVEFVL
QNFTEMNKLWVRMQHQGPSREKEKREKERNELRDLVGKNLHVLSQIEGVDLEMYKDVVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQSSVDIKTVLSQLME
RLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTAGVVTLYSSLLTFTLHVHP
DRLDYADQVLGACVKNLSGKGKIEDKKATKQIVALLSAPLEKYNDIMTALKLSNYPHVME
FLDVPTNKVMATVIIQSIMKNGTRISTSDKVESLFELIKGLIKDSDGTPDDELDEDDFKE
EQNSVARLIQMFYNDDPEEMLKIIETVRKHILTGGPKRLPFTVPPLMFSSLKLVRQLQGQ
SQSQEENPFGDDASTSPKKIFQLLNQTIETLSGVLAPELALQLCLQCAEAANDCELEPVA
YEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKK
PDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFI
EILNKYLYFFEKGNPQVTVAAIQGLIELIMNEMQSDTATPDPSADAFLATTMRYIQFQKQ
KGGTVGEKYEPIKV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgacggaaccgaagatgaagagaagttcctcgccgccggaatcgccggtctt
caacagaactccttctacatgcaccgtgcattggattcgaataatctcagagatgctttg
aaatattctgctcagatgctttctgaacttcgtacttccaagctttctcctcacaaatac
tacgaactctatatgcgcgcatttgatcaattgaggaagctggagatgttcttcgaggaa
gagactcgtcgtggatgctccattattgatctttacgagcttgtccagcatgccggcaac
attttgccgcgattgtatctcctctgtacagtaggatctgtatacatcaaatcgaaggaa
gctcctgctaaggatgttcttaaggatcttgtagagatgtgtcgtggcattcagaatcct
gttcgtggactctttctcagaagctatctttctcaagttagcaaggataaattgccggat
attggttctgagtacgagggggatgcagatactgtatcagatgctgtagagtttgtactc
caaaatttcacagaaatgaacaagctttgggtgcggatgcagcatcaggggccttcccgg
gagaaggagaaacgagaaaaggagaggaacgagctgcgagatcttgttgggaagaatctt
catgttctcagtcagatagagggtgttgaccttgagatgtacaaagatgttgtgcttcct
agagtacttgagcaggtcgtgaattgcaaagatgagttggcccaattctacttgatggat
tgcataattcaagtcttccctgatgagtaccatttgcaaactcttgatgtgctgttgggc
gcttaccctcaacttcagtcatctgttgacatcaagacagtactatcccagttaatggaa
aggctttcaaattatgctgcttcaagtgcagaggttttgcccgagtttttgcaggtggaa
gcattttccaaattaagcaatgcaattggcaaggtcatagaggcacagcctgacatgccc
accgctggcgttgtaactttatattcatctcttcttaccttcactcttcatgtccaccct
gatcgactagattatgctgatcaagtcttgggagcatgtgtgaaaaatctctctggcaaa
ggtaaaattgaggacaagaaggcaactaagcagattgttgctttattaagtgctccacta
gagaaatataatgacattatgactgccctgaagctttcaaactaccctcatgtaatggaa
ttccttgacgttccaactaacaaggtcatggcaactgttattattcaaagcattatgaaa
aatggaacacgcatttctacctctgacaaggttgaatcattgtttgaactgataaagggg
cttatcaaggattctgacgggactcctgatgatgagttggatgaagatgatttcaaagag
gagcagaattctgttgcacgtctgatccaaatgttttataatgatgatccagaagagatg
ttgaagataattgaaactgtgaggaagcacatactgactggaggaccaaagcgtctgcct
ttcactgttccacctcttatgttttcttctttaaagttggtcaggcagttgcaaggtcaa
agtcaaagtcaagaagaaaatccttttggagatgatgcatcaacatcaccaaagaaaatc
tttcagcttttaaatcagaccatcgagactctgtccggtgtcctggcaccagagttagca
ttgcagttgtgcttgcaatgtgctgaggctgcaaatgactgtgagttggaaccagttgca
tatgaattttttacgcaagcttatattctatacgaagaagaaatttctgattccagagca
caggtcacagctattcatttaataataggaactcttcaaaggatgcatgtcttcggtgtt
gagaacagggatactttaactcacaaggccacagggtattcagcaaagcttttaaagaag
ccagatcaatgcagagctgtgtatgcatgctcacatttgttttgggttgatgatcatgat
aacatgaaagatggagagagagtcctattatgccttaagcgggctttaaggattgcaaat
gctgcacaacaaatggcaaatgcagcacgaggtagcaccggatcagtaatgctcttcatt
gagattttgaacaagtatctttacttctttgagaagggaaacccacaagttacagttgct
gctatccagggcctaattgagttaattatgaatgaaatgcaaagtgacactgcaactcca
gatccatcggcagatgctttcttagccactactatgcgctatatacagttccaaaaacaa
aagggtggtacagttggtgagaaatatgaaccgatcaaggtttga
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