Medicago truncatula (barrel medic): 11424029
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Entry
11424029 CDS
T01716
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11424029
04121 Ubiquitin system [BR:
mtr04121
]
11424029
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
11424029
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
11424029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
11424029
NCBI-ProteinID:
XP_003605239
UniProt:
G7JH33
LinkDB
All DBs
Position
4:9864156..9868239
Genome browser
AA seq
1011 aa
AA seq
DB search
MSFQRRDNRVPRRRQQWTPRPSSTTNQLLPQLLQEIQDKLTKGTVECMICYDIVRRSSPI
WSCSSCYSIFHLNCTTKWARAPTSSSQTSIDWRCPGCQSVQLTSSNSIRYFCFCGKTPDP
ASDFYLTPHSCGEPCGKPLQKTGDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKITITT
RCSDDQSLITCGQQCQKLLQCGRHRCHQICHLGPCDLCRVPIDASCFCKKSLEVILCGDM
AVKGEYKAEAGVYSCGSTCGNKLACGNHMCIETCHPGSCVECPLLPTNVKTCFCGKTRLG
EERLSCLDPIPTCSQVCGKTLPCGMHHCTLTCHDGDCSPCSVLVSQKCRCGSTSKTVECC
KKTMANEKFTCEKPCGKKRNCGRHRCSERCCPLSNPNNILNATDSDPHLCSIPCGKKLRC
GKHACDSNCHSGHCPPCLETIFTDLTCACGKTSIPPPLPCGTPSPSCQLPCSVPQPCGHP
ASHSCHHGDCPPCVAPVARECVGGHVVLRNIPCSSRDIRCNKLCGKTKQCGLHACSRICH
SSPCDNQHVVQGIRTSCGQSCGAPRRDCRHTCTAPCHPSSPCPDRRCGFAVAITCTCGRL
TTNVPCDAGGSDVDSMHEASIIQKLLVPLQPLDPNGKKVPLGQRKLMCNDECAKLERKRV
LANAFEISTPNLDSFQFGENSVAHSELLADLLRRDSKWVLSVEERCKYLVLGKGKGTTHG
LKSHVFCPMLKDKRDAVRMIADRWKLAINEAGREPKKFIVVHVVQKSRAPSRVLGIKGTT
TIPSLLPPAFNSLVDMDPRLVVSFPDLPRDTNICALVLRFGGECELVWLNDKNALAVFND
PARSATAMRRLDHGSVYQGAIVAVPNTGTSVASSVTTDRGGAETVKGGALTTLTGYMWKQ
AVIIEPACREDSWDDQEGTTDCANIQSSIWKKEAPISTSSNPWTVLNQEWSSSSSANASI
KADTNMKQTESNSVAKSESGDGGSNLEHQHGRAFDTLEAYDVVDDWETTCE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccaacggagggataatagggttcctcgtcgtcgtcagcaatggactcctaga
ccatcctcaactaccaaccagttattacctcaacttctgcaagagattcaggacaagctt
accaaaggcaccgtcgaatgcatgatttgctacgacattgtgcgcagatcttcccctatc
tggtcatgctctagttgctactccatctttcacctcaactgtacaaccaagtgggctcgt
gcaccaacttcatcatcccaaactagcattgattggcgctgccccggctgtcaatctgtg
caactcacctcatccaattccatcaggtacttttgcttttgtgggaagacacctgaccct
gcatctgacttttatctcacgccacattcatgtggagaaccttgtgggaagcctcttcaa
aagacgggggatctttgccctcatgtttgtgtcttgcaatgtcatcctggtccgtgtcct
ccttgcaaagcatttgcccctcctcgtttgtgcccttgtggcaagattactattaccact
cgttgttccgacgaccaatcccttattacatgtggacaacaatgtcaaaagcttcttcaa
tgtgggcgtcatcgctgtcaccaaatttgtcatctcggtccttgtgacctgtgtcgtgtt
ccaatcgacgcctcttgcttttgcaagaaaagtttggaggttattctttgtggggacatg
gctgtcaagggtgaatacaaagcagaagctggagtttattcctgtggttccacctgtgga
aacaaacttgcatgtggtaatcacatgtgtattgagacctgtcatccgggaagttgtgtt
gagtgtccattgttgccaaccaatgttaagacatgcttctgcgggaaaactaggttgggt
gaggaacggctgagttgtttagacccaattcctacatgttcacaagtatgtggcaagacc
cttccttgcggtatgcatcattgtacactgacatgccatgacggggattgttctccttgt
tcagttttagtctcccagaagtgtcggtgtggctcaacttccaaaacggtggagtgctgt
aagaaaacaatggcgaatgagaaatttacttgtgaaaagccttgtgggaagaaaaggaat
tgtggaaggcatcgttgtagtgaacggtgttgtccgctctctaatccaaataatattcta
aatgcaacggattcggatccacatctatgttccattccatgtggaaagaagctacgttgt
gggaagcatgcgtgtgattccaattgtcacagtggtcattgcccaccttgtcttgaaact
atattcactgatttgacatgtgcttgtggcaagacttcaatccctcctccactgccatgt
ggtacaccgtcgccttcatgtcaacttccatgttcagttcctcaaccttgtggccatcca
gcatcccatagttgtcatcatggagattgccctccctgtgtggctcctgtagcaagagaa
tgtgttggtgggcatgtagttcttaggaacataccatgtagctcaagggatataagatgt
aataagctctgtggaaagactaaacaatgtggtttacatgcctgtagcagaatatgtcac
tcctcaccttgtgataatcagcatgttgtgcaaggtattcgaacttcatgcgggcaatca
tgtggcgctccgaggagagactgccgacatacatgtacagctccttgtcacccttcatct
ccatgtccagatagaagatgtggattcgctgtcgcaatcacctgtacatgtggtcgttta
acaacaaatgtcccatgtgatgctggtggtagtgatgttgattctatgcatgaagcttcc
attattcaaaagttgcttgtgccacttcaaccgttggatccaaatggcaaaaaagttcct
cttggacagcgaaaactgatgtgtaatgatgagtgcgctaagttggagcgtaaaagggtt
cttgcaaatgcttttgagattagcactccaaatctagattccttccaatttggtgagaat
tctgttgctcattctgaattacttgctgatttattgaggcgtgatagtaaatgggttttg
tccgtcgaggagagatgcaagtatttagtacttggcaagggtaaaggaactacacatggt
ctaaaatcccatgttttctgtcccatgctaaaggataagagagatgcagtgaggatgatt
gctgatagatggaagcttgcaataaatgaagctggtcgggagccaaagaaatttatagtt
gttcatgttgtccaaaaatcaagagctccatcacgcgtgctagggattaagggtactaca
accataccttctctccttcctcctgcatttaactctttagtagacatggaccctcgattg
gtcgtctcttttccagacttaccaagagatacaaatatttgtgcattggtgttgagattt
ggtggtgagtgtgaacttgtttggttaaatgataaaaatgcattggctgtttttaacgat
cctgcccgatctgcaactgcaatgagaaggttggatcatggaagtgtatatcaaggagct
attgtggctgttccaaacacagggacatctgtagcatcttcagttacaactgaccgagga
ggagctgagacagtgaaaggcggtgcgctgacaacattgacgggttatatgtggaaacag
gctgttattatagaaccagcttgtagagaagattcttgggatgatcaagaggggactact
gattgtgcaaatattcaatcatctatttggaagaaagaagcaccaatttctacttcatca
aatccttggactgtcttaaatcaagaatggtcttcaagttcatctgctaatgcttctatt
aaagctgacactaatatgaaacaaactgaaagtaattctgtggcaaagtcagaatctggt
gatggtggttcaaatctagaacaccagcatggaagagcctttgacactttggaagcttat
gatgtagtagatgattgggagactacttgtgaatga
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