Medicago truncatula (barrel medic): 11424352
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Entry
11424352 CDS
T01716
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11424352
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
11424352
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
Helicases
11424352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
ATPase
nSTAND3
AAA_19
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
11424352
NCBI-ProteinID:
XP_003605075
UniProt:
G7JDE4
LinkDB
All DBs
Position
4:complement(8510010..8516565)
Genome browser
AA seq
1331 aa
AA seq
DB search
MEFNSLSYGDGDSNALILPTKKMKKRKEMEQERGKKRGKVQSNKKQKLSKTQKKKLKKSE
DDKEKQLLLEKALKTLNENTLPEYAFPLLQSSCNINRVETVKEKRRKAVHLLKEGLDVPH
DDDLSKKQDIACTSESEEEEIHTVQVKEFEENDVIQPFRTEKEILYTTTVPLESTQEPVH
RNEVINYETVAEPVADVSTDKQPDEIRSSSPTSRSIDDIKSTNSKDRKNENPTTNFNELS
NLPHVSTQRPLTTPTVVHVYRPPEVQEKRKDLPIVMMEQEIMEAINYNSSVIVCGETGCG
KTTQVPQFLYEAGYGSSKFHARSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVR
YDKKIGENCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIRT
RQKIYDEQQKMVLSGESISPDKMVFPLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQ
FPVTMYFAKKTEITDYVGAAYKKILAIHKKLPSGGILVFVTGQREVEDLCRKLRKASKEF
IMKKVKGSVENDSNVVNETSSVEGININEINEAFEMPGSSSMQQTDRFSGYDEDDNNFDE
NESDSYDSETESELEFNDDDKNNHNGSENNNNIVDVLGNEGSLASLKAAFENLSGQATLS
SSNVNTEDGLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLV
VVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTA
AGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLL
EAENCLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKRICNSSLLLAYA
VAAAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAR
EKFRIVSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQSDK
GGLEQEYSWTHGTLEDVEHAWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISSKT
DDGVTISRAGRYQSCMVDESIFIHRWSSVSTVRPEFLVYNELLETKRPNKEGETSAKRAY
MHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSI
PISNVEHRVQVFAYALLEGQVCPCLKTVRKYMSAPPETILRRESFGQKRVGNLISKLNSR
LIDSSATLRIVWKQNPRELFSEILDWFQQGFRKHFEELWLQMLGEVLQETQERPLHKSSK
KKSKVKSKSRQ
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaactctctaagttatggagatggtgatagtaatgcactaattttgccaact
aagaagatgaagaaaaggaaagagatggaacaggaacgtggaaagaaacgtggtaaagtc
caatcaaataagaaacagaagttgagcaaaactcagaaaaagaagttgaagaaatcagag
gatgacaaggagaagcaacttctgctggaaaaagccctgaagacactaaatgagaacact
cttcctgagtatgcatttcctcttctgcagtcatcgtgcaatattaatcgggttgagacc
gtgaaggaaaagcgtaggaaggctgtgcatttattgaaagaaggattggatgtcccacat
gatgatgacctgtccaagaaacaggatattgcatgtacatctgaatccgaggaagaagag
attcatacggtgcaggttaaggaatttgaggaaaatgatgttattcaaccttttagaacc
gaaaaagaaattttatatacaacaactgttcctttggagtccactcaagaaccagttcat
agaaatgaagttattaattatgaaactgtcgctgaacctgtggctgacgtttccactgac
aagcaacctgatgaaatcagaagttcttctcccacctctcgttctattgatgacataaaa
agcaccaattcaaaggacaggaaaaatgagaaccccaccacgaacttcaatgaattgagc
aatcttccacatgtttctacacaaaggcccttgactactcctacagttgtgcatgtttat
agaccaccagaggttcaagagaaaagaaaggatcttcctattgtcatgatggagcaagag
ataatggaagctataaactacaattccagtgtcatcgtatgtggagaaactggatgtggt
aaaacaacacaggttcctcagtttctttatgaagctggctatggttcaagcaagttccat
gctcgcagtggtattattggtgtcactcaaccacgtcgagtggctgttcttgccacagca
aagcgtgtggcatatgagcttggtgttcggctaggaaaggaggttggctttcaagttagg
tacgataagaaaattggagaaaattgttctatcaagtttatgactgatggaattttgctg
cgagaagttcagaatgatattttattaaggcgttattctgtcctaattcttgatgaggct
catgaaaggagcttgaacacagacattctgatagggatgctctcgcgtgtgatcagaact
cgccaaaagatttatgatgaacaacagaagatggtcctttcaggagaaagtataagtcct
gataaaatggtttttccattaaaacttgtgctgatgagtgccaccttgcgagtgcaagac
ttcacatctggaaggttattccacactcctccacctgtgatagaagttccaacgaggcaa
tttccagttacaatgtattttgcaaagaaaaccgagataacagattatgttggtgctgca
tataagaagatcttggcaattcacaagaagttgccatctgggggcatacttgtctttgtc
actggacaaagggaagtggaggacttgtgcaggaagctacgcaaagcttcaaaggagttt
atcatgaaaaaagttaaaggatctgtggaaaatgatagcaatgtggtcaatgaaacaagt
tctgttgagggaataaatattaatgagattaatgaagcatttgagatgcctggaagttca
tccatgcaacaaactgataggtttagtggttatgatgaagatgacaataattttgatgag
aacgaatctgattcttatgattcagaaacagagagtgaattggaattcaatgatgatgat
aaaaataatcacaacggttcagagaacaataacaatattgtggatgtcttaggaaatgaa
ggaagtcttgcttcattgaaggctgctttcgaaaacttgtctgggcaagcaacattaagt
tcctcaaatgtgaatacagaagatggtttagaccaatcgaaagttggcagggagaaaata
gctagagaaaatcacgattcctctccaggtgcactctttgttctaccactttatgctatg
ctgcctgctgcagctcaacttcgtgtatttgatggagtcaaggagggagagagactagtt
gttgttgctacaaatgttgcagaaacatctttaacaattccagggattaagtatgtggtt
gatactggaagggaaaaggtgaagaattatgattcctctaatggcatggagacatatgag
gtgaaatggataagtaaggcatctgctgctcaacgtgcaggcagagctggaagaactgct
gcgggacactgttatcgtctctattcttctgcagcttttagtaatgagtttcctgagttc
tctcctgctgaagttgagaaagtacctgtccatggtgttgtccttctcttgaaatccatg
caaattaagaaggttgcaaacttcccgtttcctacttctcttaaggctgcttccctgctt
gaagctgagaattgcttgagagctcttgaagcacttgatagcaaagatgagctcacactt
ttaggaaaagccatggcactttatcctttgagtcctcgtcattctagaatgatccttact
gttataaaaaatacaaggtacaagcgtatttgtaactcaagtctgcttttggcatatgct
gttgcagctgctgctgctttgagtttgccaaatccttttgtaatgcaatatgaaggaaat
gatagcaacaaagattcagaaacgtccgagaaatctagaatgggggacaatgagaacaat
attgataaaacagaaaagacgaagagaaagaaactaaaacagacctctaaagttgctcgt
gaaaagtttcgaattgtcagtagtgatgcgctagccatagcatatgccttgcagtgtttt
gaacattcacagaattcagtacaattctgtgaagacaatgcattgcatttcaaaaccatg
gatgaaatgtccaaacttagacagcaactcctcagactggtcttttttcagagtgataaa
ggtggtttagaacaagagtactcgtggactcatggaactcttgaggatgtggaacatgct
tggcgagtttcttctgcgcactatcctctccctctggttgaggaaaggctcatttgtcga
gcaatatgtgctggctgggcagatagggttgccaaacgtattccaatttcttcaaagacc
gatgatggagtgacaatttctcgtgccggtaggtatcagtcatgcatggttgatgaaagt
attttcattcatcgttggtcatcggtctctactgtacgccccgagtttctggtttacaat
gagctattagagacaaaaagaccaaacaaagaaggggagacgagtgcgaagagagcatac
atgcatggagtaacgaatgtggacccaacttggctagttgagaatgcaaagtcttcatgc
atcttctctccacccctgacagatcccagaccattttatgatgcacaggctgaccaagta
aaatgttgggtcatcccaacctttggacgcttctgttgggaacttcctaagcattcaata
cccattagcaatgtcgagcatcgggtgcaggtgtttgcctatgctttacttgaaggtcag
gtgtgtccatgcctgaaaacagttcgaaaatacatgtcagcccctcctgaaactattttg
aggagagaatcctttggtcaaaaaagggtaggaaatcttataagcaagttaaatagcagg
ttgattgatagctctgccacgttgagaatagtgtggaagcagaatccaagagagttattt
tcagaaattttggattggtttcaacagggttttcgcaagcactttgaagagctatggtta
caaatgcttggcgaagtgctacaggagacccaagaacgacctctgcataaaagttcaaaa
aaaaagtcaaaagtaaaatctaaatcgcggcaatga
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