Medicago truncatula (barrel medic): 11424387
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Entry
11424387 CDS
T01716
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
11424387
Enzymes [BR:
mtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
11424387
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
11424387
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
11424387
NCBI-ProteinID:
XP_003602781
UniProt:
G7J3D1
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Position
3:complement(48777755..48785319)
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AA seq
380 aa
AA seq
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MMKRKREEKECMDIVWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDL
FAEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACDVPIL
HKEPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLIIARN
ATKADSFRQEIEAGLVKKQYIAKVVGEFPEDEIIVDANIDYNAREGRSTAEVRDSTKGKV
ASTKFTRISSNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYISEQTVDRSINGST
ADRSACISDASLTSNFGEKVPKDYQENSNEDFRIDPMCTNCPNLAPKGYDTDEEGLWLHC
MRYSGPGWTYECPYPDWAKL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaggaagagagaagagaaagagtgtatggatatcgtgtggcaaactccagca
aatcctcctttaccgcaagattacatcgttcgaaacggaattcgatttgttagaccatat
tacttcgaattcatcgctcatgttaaaaatcgatgggcggggaaaactattgtagattta
ttcgccgaggaatttaaaggtcgaccttatgaatattatgttagtgctgtgaaatgtgga
aggattcaagttgacggtgaaatggtgccagtttcatatgtggttaaatcatcgcaaaag
ataagccattttttacacaggcatgaaccacctgtgatggcttgcgatgttcctattctt
cataaagaaccagatgtgctaactgtttgtaagcctgcgtctgtccctgttcatccatgt
ggccaatatcgcaagaacactgttgttggcatccttcaagcagaacatgggctggcgcct
ctgtttcctgtccatcgactggatcgccttgtctccggactccttattatagccagaaat
gctacaaaagcggacagttttagacaagagattgaggctggcttagtcaagaaacaatat
attgcaaaagtagttggggaatttcccgaggatgagataattgttgatgccaatatagat
tataatgctcgagaaggaagaagcacagcagaggtcagagactctacaaaggggaaggtt
gcctccacaaaatttacccggattagtagcaatggtactcatagtattgttttatgcgaa
ccagtcactggccgcactcatcagatacgcgttcatttacagtcttctggacacccaata
gccaatgacatgctgtacatctcagagcagactgttgatagatctattaatgggtcaact
gctgatagatcagcttgcatatctgatgcttctttgacatcaaatttcggtgaaaaagtg
cccaaagattatcaagaaaattccaacgaggattttcgcattgatcctatgtgtacgaac
tgtccaaatttggcaccgaagggatatgatactgatgaagaaggtttgtggttacattgt
atgcggtactctggacctggatggacatatgaatgcccatatcctgattgggcgaaactt
tag
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