Medicago truncatula (barrel medic): 11424462
Help
Entry
11424462 CDS
T01716
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11424462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11424462
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
SR proteins
11424462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
11424462
NCBI-ProteinID:
XP_003626218
UniProt:
G7KXJ7
LinkDB
All DBs
Position
7:complement(53431556..53438266)
Genome browser
AA seq
292 aa
AA seq
DB search
MSRRSSRTIYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAED
AIRYRDGYKFDGFRLRVELAHGGRGYSSSVDRYSSYSSGSRGVSKHSEYRVLVTGLPPSA
SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYI
RVREYDRRRYTRSPSCDTRRSYSRSPSRSPYMSRSRNRSQSYSYSSKSSRSLSPKVKRTR
RSLSRSRSLSRSESARSSPEPRRSRSPRSLSQSRSPSVRSEHSQSVNSGDHD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccggtcgagtcgaacaatatatgtcggcaatcttcctggtgacattcgtttg
agagaagtagaggatcttttctacaaatttggtcctatcgttgacattgaattgaagatt
cctccaagaccaccgggttatgcttttgtggagtttgaggatgctcgtgatgctgaagat
gcaattcgttatcgagatggatacaagtttgatggctttcgattaagagttgaacttgca
catggtgggcggggatattcatcatctgtagaccgatatagtagttatagtagtggtagc
cgtggagtttccaagcattctgagtatcgtgttttggtcactggattacctccttcggct
tcatggcaagacctgaaagatcacatgcgcagagctggtgatgtatgtttctctcaagtt
ttccgtgaccgaggtggcatgactgggatagtggagtatacaaattatgaagatatgaaa
tatgctattagaaaacttgacgactcagaattccgaaatgcgttctcttgggcatacata
cgagtgagggaatatgatcgacggagatatactaggagtcccagttgtgatacaaggagg
agttattctagaagcccaagccgcagtccatatatgtcacgaagtcgtaaccgcagtcaa
agttatagctatagtagcaagagcagcagaagcttgtctccaaaagtgaaacgcactcga
cggtctttatcccgttcaaggtcattgtcaagatcagaatctgcacgttcatctcctgaa
cctcgcaggagccgaagtcctaggagcttatcacaatctcgttcaccttcggtgagatct
gaacacagccaatctgtcaactctggagaccacgattga
DBGET
integrated database retrieval system
