Medicago truncatula (barrel medic): 11424978
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Entry
11424978 CDS
T01716
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
11424978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11424978
03029 Mitochondrial biogenesis [BR:
mtr03029
]
11424978
Membrane trafficking [BR:
mtr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
11424978
Atg1 complex
11424978
Mitochondrial biogenesis [BR:
mtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
11424978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
11424978
NCBI-ProteinID:
XP_003602550
UniProt:
G7JAX9
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All DBs
Position
3:complement(47133358..47139860)
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AA seq
633 aa
AA seq
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MTTTSSHAQTEAAKTEQIITEFFAKSLHIIIESRALSASSRNFSTLSSPSSTSSSSSSSV
RPRDKWFNLALRECPTALENTDLWRHSNLQPIVVDVVLVHRNLSFSPKVRSFVKERNPFE
EFGGGSEQNEKIVERWVIQYESKKIKDCSSSNTANTTRRSSNTFLQNLYKKSTLLLRSLY
ATVRLLPAFKIFKELSSSANVSAFSLAHRVSTFFEPFTTKQEAEMLKFVFTPVDTNSGKL
CLSVMYRPCVSDVSSEPTTPLSPQVITDYVGSPLTDRLMRFPSLPVVRMPSHGSSPSSLP
FSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEMSLLH
KKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPNAEVTYSPGHT
SRQNLPPSTPIRISRCTSETERSRNLMQSCTTPEKMFSIGKESQKYSGGKIAPNSSPQIS
FSRSSSRSYQDEFDDTDFTCPFDVDDDDTTDPGSRAESFDRGDMTQLLEAGRFFPIRKSQ
GAAVGALVHMLKKAAPLHQDFSTGENLSQGARAENLKSNNFQEPNQILESLTPVSTMSSG
NRKTTSDALEEFHSYREMKNLLLMPRDGSKRQI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacatcctcacacgctcaaaccgaagcagcaaaaacagaacaaataatcaca
gaattcttcgcaaaaagcctccacataataatcgaatcaagagcactttctgcttcatct
cgcaatttcagcaccctttcttcaccatcttcaacttcttcatcttcctcatcaagtgtt
cgacccagagacaaatggttcaatctagcactcagagaatgtcctacagcgcttgaaaac
actgacctatggcgccacagtaatcttcagccaattgtggttgatgttgttttggttcat
agaaaccttagtttctctccgaaggttcgatcttttgtaaaagagagaaacccctttgaa
gaattcggaggtgggtctgaacagaatgagaagattgttgaaagatgggttattcaatat
gaaagcaagaaaattaaggattgttctagttccaacactgcaaacactacaagaaggtca
agtaatacttttttgcagaatttgtataagaaatctactttgcttttaaggtctttgtat
gctactgttaggcttttacctgcttttaagatttttaaggaacttagttcatctgcaaat
gtttctgcttttagtcttgctcatcgtgtttcgactttctttgaaccatttactactaaa
caagaagctgaaatgcttaagtttgtgttcactcctgtggatactaattccggtaagctg
tgtttatcggtgatgtatcgaccatgtgtttctgatgtgagttcggaaccaacgactcct
ttgtctccacaagttataactgattatgttgggagtcctttgactgatcggttgatgagg
tttccgtcgcttcctgttgttagaatgccatcacatggctcttctccgtcgtcattgcca
ttttcgaggagacatagttggagttatgaaaattgtagagcatcacctcctgcagttaat
tattattcgccttcacctacacattcggaatcacacacattggtttctaatgctagctct
caaggttattgtccaccctctagtttgcctcctcatccaagtgaaatgtctttgcttcat
aagaagaatgtgaatttcgatgagtactatccctcgccgaatttctctccatcaccctct
ccttcttcatcatcaccaatctatagtttgggttcgttagcttcgaaaactcttttacgc
tctgaaagtgctcctgtcaatataccaaatgctgaagttacgtattcccctggacatacc
agtaggcagaatttgccaccgtctactcctattagaatttcaaggtgcacttctgagaca
gaaagaagtaggaatcttatgcaatcgtgcaccacacctgagaagatgttttcaatcgga
aaagagtctcaaaaatattccggagggaagatagcacctaacagctcgccacagatttca
ttttccaggagctctagcaggtcttatcaggatgagtttgatgatactgattttacttgt
cctttcgacgtggatgatgacgatacaacggatccaggcagcagagcggaatctttcgat
cgtggtgatatgactcaacttcttgaagctggtaggttctttccaatcagaaagtctcaa
ggtgccgctgttggtgcacttgtgcatatgttgaagaaagcagcacctctgcatcaagac
ttctccactggtgaaaacttgtctcagggcgcccgtgctgaaaacttgaagagcaataac
tttcaagagccgaaccagattctagagagcctaacaccagtgagcacaatgtcttctggg
aataggaaaacaacaagtgatgcattggaagagtttcatagttacagagaaatgaaaaac
ttattacttatgccacgtgatggcagtaagcgacaaatatga
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