Medicago truncatula (barrel medic): 11425189
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Entry
11425189 CDS
T01716
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11425189
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
11425189
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
11425189
NCBI-ProteinID:
XP_003602203
UniProt:
G7J6S2
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All DBs
Position
3:44773500..44780207
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AA seq
504 aa
AA seq
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MASVSSQQQFRYTQPPSKVLHLRNLPWECTEEELIELGNPFGKVVNTKCNVGSNRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVHNKTAADVAGNVLLVTVEGE
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYL
LSEHVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLE
AESNVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAK
EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILGQPVPMT
VPPAQQYNGSQYTPISDPAMIPQSQAGWGTTLPTVAQSMPLQMHNNIYMPAGNMPPGNGP
MQMQPGNGPMQMPPGNMPPGSIPLQRPLQMPPGNVPMQMPPGSMPLQRPMQMPPGNMPPG
MHFPNHDMLQPTSTLPAYGSDRTQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtctctagtcagcaacagtttcggtacacccagcccccatccaaggtgctt
catttgagaaacttgccatgggaatgcactgaggaggagctgattgaacttgggaatcca
tttggcaaagttgtgaacacaaagtgcaatgtcgggtcgaatcggaatcaagcttttatt
gaatttgcggatttgaatcaagccattgcaatgatttcatactatgcctcatcatcggag
cctgcacaagtgcgagggaaaactgtatatctgcaatattcaaatcggcaagaaatagtg
cataacaaaactgctgcagatgttgctggaaatgtattgttggtaacggttgagggtgaa
gacgcacgccttgtcagcattgatgtcttgcacttggtcttttcagcttttggatttgtg
cataagattactacttttgagaagactgcaggattccaggcactggttcagttctcagat
gctgagactgccacttctgcaaaggatgctttggatggaagaagcatacctagatatctg
ctctctgaacatgtgggaccatgcaccctcaagatcacatactctggacattcagattta
actgtgaagtttcaaagccacaggagcagagactatactaatccttaccttcctgttgct
caatcagccattgagggaggtggacaggtcatgattggtttggatgggaaaagactggag
gctgagagtaacgttcttcttgcatctattgagaacatgcaatatgctgtaacgttggat
gttttacatatggttttctctgcttttggtcctatccaaaagattgcaatgtttgataag
aatggtggtttacaggctctgattcaatatccagatactcagacagctgttgtggccaaa
gaagcattggaaggacactgcatatatgatggaggtttttgcaagcttcacctttcgtac
tcacgtcatacagatcttagtataaaggtcaataatgataggagtagagactataccatt
cctatgataccagttgtgaacactcagccctcaattttagggcaacctgttcccatgacg
gttcctcctgctcagcagtataatggttctcaatatactccaatttctgacccggctatg
ataccccaatctcaggcaggatggggaacaactctaccaacagttgctcaatctatgcca
ttgcagatgcacaataacatttacatgccagctggaaacatgccacctggaaatgggcca
atgcaaatgcaacctggaaatgggccaatgcaaatgccacctggaaacatgccacctggg
agcattccactacaaaggccactacaaatgccacctggaaatgtgccaatgcaaatgcca
cctgggagcatgccactacaaaggccaatgcaaatgccacctggaaacatgccaccagga
atgcatttcccaaatcatgacatgctacaaccgacatccacattgcccgcatatggatct
gatcgtactcaatag
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