KEGG   Medicago truncatula (barrel medic): 11425250
Entry
11425250          CDS       T01716                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mtr03041]
    11425250
Spliceosome [BR:mtr03041]
 Complex B
  Other components
   Complex B specific factors
    11425250
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N DUF7165 PEP5_VPS11_N Beta-prop_WDR75_2nd PD40 Beta-prop_IFT122_2nd Mala_s_1-like Beta-prop_LRRK2 Beta-prop_IP5PC_F zf_topless 7TMR-HDED Beta-prop_ELP1_2nd WD40_like
Other DBs
NCBI-GeneID: 11425250
NCBI-ProteinID: XP_003600112
UniProt: G7IY21
LinkDB
Position
3:complement(23878624..23890935)
AA seq 513 aa
MSTLEIEARDVIKTVLQFCKENSLHQTFQTLQNECQVSLNTVDSIETFVADINGGRWDAI
LPQVSQLKLPRNTLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQESTKEKRRAQIAQAIAAEVTVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDMYPTNLSHTIKFGAKSHAECARFSPDGQYLVSCSIDGFIEV
WDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLR
RLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTND
GTRVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLM
TVHDKEIIGVTHHPHRNLVATFSDDHTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctacgctagaaatcgaagctcgagatgtgattaaaaccgtgcttcaattctgcaaa
gaaaactctttgcatcaaacgtttcaaacactgcagaatgagtgtcaagtttctctgaat
actgttgatagcattgaaacttttgttgctgatattaatggtggaagatgggatgctatt
ttgcctcaagtttctcaacttaagcttcctaggaatacgttggaggatttgtatgagcag
attgtattagaaatgattgaacttagagaactggataccgcacgtgctatattaaggcaa
acacaggtgatgggtgtcatgaaacaagagcaacctgaaagatatttgcggcttgagcat
cttctagttagaacgtattttgacccaaatgaggcctatcaagaatcaacaaaagagaag
cgacgtgcgcaaatagcccaagctattgcagcagaagtgactgtggtgccaccttccaga
ttaatggctttaattggtcaggctttgaagtggcagcagcatcaaggtttacttcctcct
ggaacacagtttgatttgtttcgtggaacagctgctatgaaacaagatgtggatgacatg
tatccaaccaatctttctcacactataaagtttggggcaaaaagtcatgcggaatgtgct
cgcttttcaccagacgggcaatatctcgtttcgtgctcgattgatgggtttattgaggtc
tgggattacataagtggaaaactcaagaaagatctacagtaccaggcagaagaaacattc
atgatgcatgatgagcctgtgctttgtgtagactttagcagagattcagagatgattgcg
tctgggtcaacagatggaaagattaaagtgtggcgtataaggactgctcaatgcttgcgg
cgtcttgagcatgcacattcccaaggtgtcacaagtgtttccttctctcgtgatggaagc
caattattaagtacttcatttgacagcactgcaagaatccatggcctcaaatctggaaag
atgttgaaagagtttcgtggccatacatcttatgtgaacgatgcaactttcaccaacgat
gggactcgtgttattactgcatccagtgattgtacagtcaaggtctgggatttgaagact
acagattgcttacaaacatttaagccacctcctcctttaaggggaggagatgcttctgtt
aattctgttttcattttccccaagaatactgaacacattgttgtttgtaacaaaacctca
tcaatatacatcatgacacttcaaggacaggttgtgaagagtttctcatccggtaaaaga
gagggcggagacttcgttgcagcctgcatttcacctaaaggggaatggatttactgtgtt
ggtgaagacaggaatatgtactgcttcagctatcaatctggcaaactggagcatttaatg
acggttcatgataaggaaattatcggtgtcactcatcatccccataggaatcttgttgca
acttttagtgacgaccacacaatgaagttgtggaagccttga

DBGET integrated database retrieval system