Medicago truncatula (barrel medic): 11426059
Help
Entry
11426059 CDS
T01716
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03018
RNA degradation
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11426059
09123 Folding, sorting and degradation
03018 RNA degradation
11426059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11426059
03041 Spliceosome [BR:
mtr03041
]
11426059
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
11426059
mRNA degradation factors
5'-3' decay
Lsm complex
11426059
Spliceosome [BR:
mtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
11426059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
11426059
NCBI-ProteinID:
XP_003630090
UniProt:
G7LB86
LinkDB
All DBs
Position
8:complement(42328490..42331821)
Genome browser
AA seq
150 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPPGVGRGRGRGREDAAGAGGRQTKGPGRGFD
DGGARGAGGRGRTSQGGKPGGSRGAGRGRG
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttctcttcttaagactgcacaaggccaccctatgttggtggagctgaaa
aatggagagacatataacgggcatttggttaattgtgatacatggatgaacattcatctc
cgagaagttatttgtacctctaaagatggagatagattttggcggatgcctgaatgctac
atacgaggaaatacgatcaagtaccttcgagttcctgatgaggttattgacaaagttcag
gaagaaaagagccgtacagatcgcaagccacctggtgtgggacgtggtaggggtagaggt
agggaggatgctgctggtgctggtggacgccaaacaaaaggccctgggcgtggttttgat
gatggtggtgctagaggagccggaggccgaggcaggactagccaaggtggaaagcctgga
ggaagcagaggtgctgggcggggtagaggatga
DBGET
integrated database retrieval system