KEGG   Medicago truncatula (barrel medic): 11426059
Entry
11426059          CDS       T01716                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03018  RNA degradation
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11426059
  09123 Folding, sorting and degradation
   03018 RNA degradation
    11426059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11426059
   03041 Spliceosome [BR:mtr03041]
    11426059
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     11426059
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     11426059
Spliceosome [BR:mtr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    11426059
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 11426059
NCBI-ProteinID: XP_003630090
UniProt: G7LB86
LinkDB
Position
8:complement(42328490..42331821)
AA seq 150 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPPGVGRGRGRGREDAAGAGGRQTKGPGRGFD
DGGARGAGGRGRTSQGGKPGGSRGAGRGRG
NT seq 453 nt   +upstreamnt  +downstreamnt
atgcttcctctttctcttcttaagactgcacaaggccaccctatgttggtggagctgaaa
aatggagagacatataacgggcatttggttaattgtgatacatggatgaacattcatctc
cgagaagttatttgtacctctaaagatggagatagattttggcggatgcctgaatgctac
atacgaggaaatacgatcaagtaccttcgagttcctgatgaggttattgacaaagttcag
gaagaaaagagccgtacagatcgcaagccacctggtgtgggacgtggtaggggtagaggt
agggaggatgctgctggtgctggtggacgccaaacaaaaggccctgggcgtggttttgat
gatggtggtgctagaggagccggaggccgaggcaggactagccaaggtggaaagcctgga
ggaagcagaggtgctgggcggggtagaggatga

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