Medicago truncatula (barrel medic): 11426224
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Entry
11426224 CDS
T01716
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
11426224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11426224
03029 Mitochondrial biogenesis [BR:
mtr03029
]
11426224
Membrane trafficking [BR:
mtr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
11426224
Atg1 complex
11426224
Mitochondrial biogenesis [BR:
mtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
11426224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
11426224
NCBI-ProteinID:
XP_003615489
UniProt:
G7K663
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Position
5:30414954..30418979
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AA seq
584 aa
AA seq
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MDLQNNMQPELGKLEQIVYQFLLKCLHIILDSRVPLLRQHDRSGELSMGGSRVKRSDKWF
NFALGDRPSALDNLNFWHRNLMDPMIIDIILVHQENGSSVETVIERWNVQYECPRGMAPQ
TSDTTVSYKKTYQKSIILFRALYSQMRLLPTHKIFRQLSATNHSCNFDIVYKVSSFSDPF
SREEGGMMGEYIFTPIDALPGRLSLSVTYRTTLSDFNLQCLTLPTKIIADYVGSPNTDPL
RYFPSSVKGVRAPPSSSPLERPHSWTPGFHKAAPFVQNHQYVGSPPAHRGSHKPFDFPSP
PTDNFNNRYHNRRIQSRSRSTSYDEYQLSPPFSSSPSPSPPIHIGNTLHTRMRSETAPVT
IPHPMMGKSSRNLSPNFLDPNRNSLPPLSPRRNDTSSHESPSGIRSFRKIESLKIGQKIV
RDSKDDSGRFSGLLSSSDSPRIGASRTSSSRLSFQDDLDDGDFSCPFDVDDVDPPNVLSS
HNVDGRKSALESPSTSLPIGRKSQDAAVGVLVHMLRTAPPLRQDSSCYSSHSLKAELDGG
VATASGFFMPRKTTDALEELRSYREMRDLLLSKSGTRILKRDET
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcagaataatatgcagcctgaattgggaaaattggagcagattgtttatcaa
tttcttttgaagtgtttacacatcattttggattcaagggtaccgttgttacgtcaacat
gatagaagcggtgagttatcaatgggtggttctcgtgtgaagaggagtgataaatggttt
aatttcgccttaggtgatcgaccgtctgctcttgataacttgaacttttggcataggaat
ttgatggatccaatgataattgacattatactagttcatcaagagaatggttcttctgtt
gagacagttattgagaggtggaatgttcaatatgaatgtccaagaggaatggctcctcaa
actagtgacactactgtctcttacaagaaaacataccagaagtcgattatactgtttcgt
gcgctttattctcaaatgaggcttctcccaactcataagatatttaggcaactaagtgca
acaaatcatagttgtaattttgatattgtctataaggtatcttcctttagtgatccattt
tctagggaagaaggagggatgatgggagaatatattttcacacccattgacgcgcttcca
ggacgccttagcttatctgtgacttaccgtactacattatctgatttcaaccttcagtgt
ttaacattaccaacaaaaataatcgctgattatgttggaagcccgaataccgatccttta
aggtatttcccttcttcagtaaagggtgttcgtgcgcctccgtcttcttcgccacttgaa
cgccctcatagctggacgcctggttttcataaagcagcgccttttgtacagaaccatcag
tatgttggatcaccaccggcacatcgtggttctcacaagccatttgattttccatctcca
cctactgataatttcaataatagatatcataaccgtcgaatacaaagtcggtcaaggtct
acaagttatgatgagtatcaactttctcctccattctcatcctcaccatctccttcacca
cctatacatattggcaatacgttgcatacccgtatgcgctctgaaacagcacctgtgact
atacctcatcccatgatgggaaaaagctctagaaatctttctcctaattttttagatcct
aatagaaattctctgcctccattatctcccagaaggaatgatacatcgtcacatgagtct
ccatctggaatcaggtcattcaggaaaatagaatctctaaagattggtcaaaagattgtc
agagatagcaaggatgattcggggcggttctctggattgttatcttctagtgactcacca
cgcattggagcttcgagaacatcaagtagtagattatcttttcaggatgacttggatgat
ggtgacttttcgtgtccttttgatgttgatgatgttgaccctcccaatgttctgtcaagc
cataatgtggatgggaggaagagtgctttggagtccccttcaacatcattaccaataggg
agaaaatcacaagatgctgctgttggtgttcttgtgcacatgcttagaacagcgcctcct
ttgcgccaagattcaagctgttattcatcacattccctgaaggctgagctcgatggagga
gttgctaccgcttccggattcttcatgcctcgaaagacaactgatgcacttgaagagctt
aggagttacagagaaatgagagaccttcttctttccaagagtggtactcggatcctgaaa
agagatgaaacttaa
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