KEGG   Medicago truncatula (barrel medic): 11426224
Entry
11426224          CDS       T01716                                 
Name
(RefSeq) autophagy-related protein 13a
  KO
K08331  autophagy-related protein 13
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    11426224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    11426224
   03029 Mitochondrial biogenesis [BR:mtr03029]
    11426224
Membrane trafficking [BR:mtr04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    11426224
   Atg1 complex
    11426224
Mitochondrial biogenesis [BR:mtr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    11426224
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 11426224
NCBI-ProteinID: XP_003615489
UniProt: G7K663
LinkDB
Position
5:30414954..30418979
AA seq 584 aa
MDLQNNMQPELGKLEQIVYQFLLKCLHIILDSRVPLLRQHDRSGELSMGGSRVKRSDKWF
NFALGDRPSALDNLNFWHRNLMDPMIIDIILVHQENGSSVETVIERWNVQYECPRGMAPQ
TSDTTVSYKKTYQKSIILFRALYSQMRLLPTHKIFRQLSATNHSCNFDIVYKVSSFSDPF
SREEGGMMGEYIFTPIDALPGRLSLSVTYRTTLSDFNLQCLTLPTKIIADYVGSPNTDPL
RYFPSSVKGVRAPPSSSPLERPHSWTPGFHKAAPFVQNHQYVGSPPAHRGSHKPFDFPSP
PTDNFNNRYHNRRIQSRSRSTSYDEYQLSPPFSSSPSPSPPIHIGNTLHTRMRSETAPVT
IPHPMMGKSSRNLSPNFLDPNRNSLPPLSPRRNDTSSHESPSGIRSFRKIESLKIGQKIV
RDSKDDSGRFSGLLSSSDSPRIGASRTSSSRLSFQDDLDDGDFSCPFDVDDVDPPNVLSS
HNVDGRKSALESPSTSLPIGRKSQDAAVGVLVHMLRTAPPLRQDSSCYSSHSLKAELDGG
VATASGFFMPRKTTDALEELRSYREMRDLLLSKSGTRILKRDET
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggatttgcagaataatatgcagcctgaattgggaaaattggagcagattgtttatcaa
tttcttttgaagtgtttacacatcattttggattcaagggtaccgttgttacgtcaacat
gatagaagcggtgagttatcaatgggtggttctcgtgtgaagaggagtgataaatggttt
aatttcgccttaggtgatcgaccgtctgctcttgataacttgaacttttggcataggaat
ttgatggatccaatgataattgacattatactagttcatcaagagaatggttcttctgtt
gagacagttattgagaggtggaatgttcaatatgaatgtccaagaggaatggctcctcaa
actagtgacactactgtctcttacaagaaaacataccagaagtcgattatactgtttcgt
gcgctttattctcaaatgaggcttctcccaactcataagatatttaggcaactaagtgca
acaaatcatagttgtaattttgatattgtctataaggtatcttcctttagtgatccattt
tctagggaagaaggagggatgatgggagaatatattttcacacccattgacgcgcttcca
ggacgccttagcttatctgtgacttaccgtactacattatctgatttcaaccttcagtgt
ttaacattaccaacaaaaataatcgctgattatgttggaagcccgaataccgatccttta
aggtatttcccttcttcagtaaagggtgttcgtgcgcctccgtcttcttcgccacttgaa
cgccctcatagctggacgcctggttttcataaagcagcgccttttgtacagaaccatcag
tatgttggatcaccaccggcacatcgtggttctcacaagccatttgattttccatctcca
cctactgataatttcaataatagatatcataaccgtcgaatacaaagtcggtcaaggtct
acaagttatgatgagtatcaactttctcctccattctcatcctcaccatctccttcacca
cctatacatattggcaatacgttgcatacccgtatgcgctctgaaacagcacctgtgact
atacctcatcccatgatgggaaaaagctctagaaatctttctcctaattttttagatcct
aatagaaattctctgcctccattatctcccagaaggaatgatacatcgtcacatgagtct
ccatctggaatcaggtcattcaggaaaatagaatctctaaagattggtcaaaagattgtc
agagatagcaaggatgattcggggcggttctctggattgttatcttctagtgactcacca
cgcattggagcttcgagaacatcaagtagtagattatcttttcaggatgacttggatgat
ggtgacttttcgtgtccttttgatgttgatgatgttgaccctcccaatgttctgtcaagc
cataatgtggatgggaggaagagtgctttggagtccccttcaacatcattaccaataggg
agaaaatcacaagatgctgctgttggtgttcttgtgcacatgcttagaacagcgcctcct
ttgcgccaagattcaagctgttattcatcacattccctgaaggctgagctcgatggagga
gttgctaccgcttccggattcttcatgcctcgaaagacaactgatgcacttgaagagctt
aggagttacagagaaatgagagaccttcttctttccaagagtggtactcggatcctgaaa
agagatgaaacttaa

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