Medicago truncatula (barrel medic): 11426848
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Entry
11426848 CDS
T01716
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
11426848
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
11426848
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
11426848
NCBI-ProteinID:
XP_003615341
UniProt:
G7JYH9
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Position
5:complement(29549455..29557152)
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AA seq
644 aa
AA seq
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MSSQAVQLRIKSNHVVMDNGIVQVYLSNPGGFVTRIQYNGIDNLLEALNEKNNRGYWDVV
WSEYGSTGTTGTFERIVGTSFNVIMETEEQVEISFKRTWNPSLKGKLSPLNIDKRYVMLR
NSSGFYSYAIFEHLKEWPAFNIPQIRIVYKLRKDKFHYMAMADNRQRLMPLPDDRLPGRG
KELIPPEAVLLVNPIEPEFLGEVDDKYQYSSENINLKVHGWISAESETIPATGFWVIIPS
NEFRSGGLVKQNLTSHVGPISLAMFLSAHYAGEDIVLKLQPNEPWKKVFGPTFVYLNNLL
DHDEDPLAQLWEDAKFQMNKEVQSWPYDFPASDDFQKASQRGSVCGTLLVRDRCVSDKDI
IAKGAYVGLAPPGDAGSWQRECKGYQFWSKSNEEGYFSINNIRSGDYNLYAWVPGFIGEY
WNNVVLKITPGCEINVDDIVFEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKFINKLFKDH
PDKFRQYGLWERYAELYPNEDLIYNVGVSDYTKDWFYAQVTRKKNDGSYQGTTWQIKFNM
DDVQENGLYKLRLALASANVSELQVRVNDEKQDPPLFTTGVIGKDNAIARHGIHGLYWLF
NIGVPSILLIKGDNTIFLTQTMATGPLPLFQGIMYDYIRLESPY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacaagcagtgcaattgcgtatcaagagtaatcatgtggttatggacaatggt
atagtgcaagtgtatttatccaatcctggtggatttgtaactagaatacaatataatggc
attgataatctgcttgaagctcttaacgaaaagaataatagagggtattgggatgtcgtt
tggagtgaatatggaagtacaggaacaaccggaacattcgagcggattgtgggaacaagt
tttaatgtgataatggaaacagaagaacaagttgaaatctcatttaaaagaacatggaat
ccatctctaaagggaaagttgtcacctctaaatatagacaaaaggtatgtgatgctacgt
aattcctcaggattttattcatatgctatctttgaacacctaaaggagtggccagctttc
aacatacctcaaatcaggattgtttataagcttcgtaaagacaagtttcattacatggct
atggctgataataggcaaaggttgatgcctctccctgatgatcgattacctggaagagga
aaagaacttattcccccagaagctgttttgcttgtaaatcccatcgagccagaattttta
ggagaggttgatgacaagtaccaatactcaagtgagaacataaaccttaaggttcatgga
tggataagtgcagagtctgaaacaattccagcaacaggtttttgggtaatcatacctagc
aatgaatttcgatcaggtggtcttgttaaacagaatcttacctcccatgttggccccatc
agccttgcaatgtttcttagtgcacattacgcaggagaggatatagttcttaaactccag
cctaatgagccatggaaaaaagtttttgggccaacttttgtctatcttaacaacttgttg
gatcatgatgaggacccactagctcaactctgggaggacgccaaatttcagatgaacaaa
gaagtacaaagttggccctatgattttccagcttcagatgattttcaaaaggctagccaa
aggggtagcgtttgtggcacgttacttgttcgtgacaggtgtgtaagtgacaaggacata
atagcaaaaggtgcatatgtaggattagccccaccaggagatgctggatcttggcaaagg
gaatgcaagggataccaattttggagtaaatcaaacgaggaaggctacttttcaatcaat
aatatacggagtggtgattacaatctatatgcatgggttccaggtttcattggagaatat
tggaacaatgttgtcctcaaaataaccccaggttgcgagataaatgttgatgacatagtc
tttgagcctccaagagatggtccaacattatgggagattggaattcctgatcgctctgct
gctgagttctatgttccagatcctaatccaaaattcataaacaagctttttaaagaccat
ccagacaagtttaggcagtatggcttgtgggaaagatatgcagagctatacccaaatgaa
gatttgatttataatgttggtgttagtgactacacaaaagattggttctatgcacaagtc
accaggaagaaaaatgatggcagttaccaaggaactacatggcaaattaagttcaacatg
gatgatgttcaagaaaatggactgtataaattaagattagctcttgcaagtgcaaatgtc
tctgaattacaggttagagtgaatgatgaaaaacaagatcctccactatttactacggga
gtgattgggaaggacaatgcaatagctagacatggaattcatggactctattggctattc
aacattggtgtgccaagtattttgctaatcaaaggagataatactatttttctaacacaa
actatggctactggtcccttgcccctttttcagggaataatgtatgattatattcgttta
gaaagcccctattaa
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